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v2.7.10: ECitMatch fixes: HTTP 500 retry, dropped row reconciliation, validation

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@cyanheads cyanheads released this 04 Jun 07:59
· 25 commits to main since this release
v2.7.10
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cyanheads Casey Hand
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cyanheads Casey Hand
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ECitMatch fixes: HTTP 500 retry, dropped row reconciliation, validation

Three fixes to the ECitMatch/lookup_citation pipeline.

Fixed:

  • HTTP 500 retry — NCBI eutils proxy returns 500 for transient mesh-layer failures; reclassified as ServiceUnavailable at the api-client boundary so withRetry picks them up. 501 stays non-retryable. (#62)
  • Dropped citation reconciliation — eCitMatch omits response lines for citations it cannot classify; results are now reconciled against submitted citations, with synthesized not_found rows for any gaps. (#54)
  • Citation validation — pubmed_lookup_citation now requires at least journal or year per citation; author-only and volume-only inputs that ECitMatch cannot match are rejected before the API round-trip. (#39)

776 tests pass; bun run devcheck clean.

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