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PRNP_CJD-critria-update#371

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hdashnow merged 3 commits into
dashnowlab:curation-detailsfrom
elbayaliyev:PRNP_CJD-critria-update
May 14, 2026
Merged

PRNP_CJD-critria-update#371
hdashnow merged 3 commits into
dashnowlab:curation-detailsfrom
elbayaliyev:PRNP_CJD-critria-update

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Description

Updated the existing PRNP_CJD criTRia JSON entry to improve curator-facing evidence descriptions and add a root-level disease/locus summary. The changes clarify that PRNP octapeptide repeat insertions in the exon 2/N-terminal coding repeat region are associated with autosomal dominant genetic CJD/inherited prion disease, and they replace null or vague evidence details with concise source-specific summaries. The original scores, evidence rows, schema, summaries, classification, publication count, and publication interval were preserved.

Fixes: # Link to any relevant issues and/or discussions

Major Changes
None
Minor Changes
Added root-level Description for PRNP_CJD.
Updated existing evidence details for:
Probands citing pmid:29887139
Segregation citing pmid:1683708
Biochemical function citing pmid:37379724
Protein interaction citing pmid:29939637
Regulatory Impact citing pmid:36977684; pmid:38467784; pmid:1683708
Clarified that the Protein interaction evidence is gene-level rather than OPRI-specific.
Flagged the Regulatory Impact row for curator review because the uploaded sources do not support PRNP OPRI-specific epigenetic, splicing, or expression-regulatory evidence.
No scores, evidence categories, total score, classification, or publication metadata were changed. Original score/classification values are unchanged from the prior JSON.

@elbayaliyev elbayaliyev changed the title Update criTRia-curations.json PRNP_CJD-critria-update May 8, 2026
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netlify Bot commented May 8, 2026

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@hdashnow hdashnow force-pushed the PRNP_CJD-critria-update branch from 5886fb7 to 85aaf4d Compare May 9, 2026 01:45
@hdashnow hdashnow changed the base branch from main to curation-details May 9, 2026 01:45
@hdashnow hdashnow merged commit 9e14bf1 into dashnowlab:curation-details May 14, 2026
hdashnow added a commit that referenced this pull request May 14, 2026
Description

Updated the existing PRNP_CJD criTRia JSON entry to improve
curator-facing evidence descriptions and add a root-level disease/locus
summary. The changes clarify that PRNP octapeptide repeat insertions in
the exon 2/N-terminal coding repeat region are associated with autosomal
dominant genetic CJD/inherited prion disease, and they replace null or
vague evidence details with concise source-specific summaries. The
original scores, evidence rows, schema, summaries, classification,
publication count, and publication interval were preserved.

Fixes: # Link to any relevant issues and/or discussions

Major Changes
None
Minor Changes
Added root-level Description for PRNP_CJD.
Updated existing evidence details for:
Probands citing pmid:29887139
Segregation citing pmid:1683708
Biochemical function citing pmid:37379724
Protein interaction citing pmid:29939637
Regulatory Impact citing pmid:36977684; pmid:38467784; pmid:1683708
Clarified that the Protein interaction evidence is gene-level rather
than OPRI-specific.
Flagged the Regulatory Impact row for curator review because the
uploaded sources do not support PRNP OPRI-specific epigenetic, splicing,
or expression-regulatory evidence.
No scores, evidence categories, total score, classification, or
publication metadata were changed. Original score/classification values
are unchanged from the prior JSON.

---------

Co-authored-by: Harriet Dashnow <h.dashnow@gmail.com>
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2 participants