Topic 1 assignment

1. Create your github account, follow my account (davidaray), create repository named “Intro to Python”
2. Create an HPCC account
3. Navigate to my directory: /lustre/scratch/daray/bat1kdatafreeze/final_assembliesand determine how many files are in that directory. Helpful tools: https://github.com/davidaray/Genomes-and-Genome-Evolution/wiki/01.-Logging-In-to-HPCC-and-an-Intro-to-Bash-and-Linux-Navigation. In particular, the sections on wc, ls, cd, paths,
4. Create a new directory in your scratch called “testing”
5. Install python using the instructions at https://www.depts.ttu.edu/hpcc/userguides/application_guides/python.local_installation.php Afterward, use conda to create a new environment called ‘biopython’ and install biopython within that environment.
6. Copy/paste your terminal history into your blackboard and label it “week1.txt”