runtimeError

[13yong]

The following error was encountered while using dpgen：

RuntimeError: Get error code 127 in calling cd /home/m-dpmd1/work/dpgen/a28ac5213a807204ab5f8e76b1ee3223bae1a059 && qsub 2abc6109033ff0a12ef8ac3459c36425d4447754.sub through ssh with job: a28ac5213a807204ab5f8e76b1ee3223bae1a059 . message: bash: qsub: command not found

But when I ssh the root, the "qsub *.sub" can be used normally. And also when I use the same machine.json with different accounts, it can also work.
So I need some suggests. Thank you!

[13yong]

By the way, how to specify the maximum running time of the PBS task in the machine?

[njzjz]

Please see documentation

Note that SSH context is non-login, so bash_profile files will not be executed.

[13yong]

Please see documentation

Note that SSH context is non-login, so bash_profile files will not be executed.

Sorry I can not get your means.
My machine.json file is set as follows:

context_type": "SSH",
"batch_type": "torque",
"local_root": "./",
"remote_root": "/home/m-dpmd1/work/dpgen",
"remote_profile": {
"hostname": "202.xxx.xxx.xxx",
"username": "m-dpmd1",
"password": "",
"port": 22" "

It doesn`t work!
But the machine.json file is set as follows :

"context_type": "SSH",
"batch_type": "torque",
"local_root": "./",
"remote_root": "/home/m-zc3/work/dpgen",
"remote_profile": {
"hostname": "202.xxx.xxx.xxx",
"username": "m-zc3",
"password": "",
"port": 22

It will work normally !
And there is one *.sub in my remote_path, in theory there will be more.

[njzjz]

If different users have different behavior, the most possible reason is that their .bashrc have different contents.