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Using a bulk solvent model when generating intensities from a reference model#2414

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jbeilstenedmands merged 4 commits intodials:mainfrom
jbeilstenedmands:using_pdb_reference
May 12, 2023
Merged

Using a bulk solvent model when generating intensities from a reference model#2414
jbeilstenedmands merged 4 commits intodials:mainfrom
jbeilstenedmands:using_pdb_reference

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The solvent model is an important contribution to the calculated intensities in protein crystallography, and should be included when generating intensities from a model file with mmtbx.
This change also allows setting of the k_sol and b_sol parameters, which are set to sensible default values as described in Fokine and Urzhumtsev, Acta Cryst. (2002). D58, 1387-1392

@jbeilstenedmands jbeilstenedmands merged commit fd5cbbc into dials:main May 12, 2023
@jbeilstenedmands jbeilstenedmands deleted the using_pdb_reference branch May 12, 2023 12:40
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