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We had a problem where the user probably deleted the two last languages in the Excel file, but Excel still considered them to exist, this could be seen by doing a Ctrl+A in the Excel file where the two last columns were selected even if they were empty. This was also confirmed by exporting to CSV.
Attempting to load this Excel file would raise an exception with the message "Duplicate language in header". It took us a few hours to figure out that the solution was to delete those two columns in Excel.
IMO, the tool should discard empty trailing columns, or at least give a more detailed exception message when this particular condition happens.
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