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* Added plotting of two parameters Added function to plot two parameters as scatter plot from Particle_list. Also added function to api to plot properties of multiple particle lists on the same plot. * Added option to have str and not list of properties to plot Ensures backwards compatibility * Add plotting tests * Add particle clustering via KMeans * Add return of particle_list objects to cluster analysis * Fix bugs * Add scikit-learn to dependencies * Update scikit-learn requirement * Update setup.py * Added documentation for scatter plots * Added docstring * Create test_particle_clustering.py * Update test_particle_clustering.py * Update test_particle_clustering.py * Added plotting of two parameters Added function to plot two parameters as scatter plot from Particle_list. Also added function to api to plot properties of multiple particle lists on the same plot. * Added option to have str and not list of properties to plot Ensures backwards compatibility * Add plotting tests * Added documentation for scatter plots * Update test_particle_clustering.py * Update requirements.txt * Update setup.py * Update test_particle_clustering.py * Added particle clustering documentation * Added background value * Update ParticleAnalysis.py * Update ParticleAnalysis.py * Updated version and style changes * Update LICENSE * Added x and y coordinates of particle to properties as property "centroid" * Change centroid to x and y values * Added ParticleAnalysisSeries function for time series New function to anlalyse time series data that gives particles a frame property. * Fix SegUI bug for linux Changed the saving and loading of files from SegUI so that it doesn't raise an error in linux. * Update ParticleAnalysis to remove loading/saving bug * Add ParticleAnalysisSeries to api and fix bug * Add initial time series function * timeseriesanalysis export trackpy frame * Added timeseriesanalysis docstring * Added tests * Update test_particle_analysis.py * Update setup.py * Added masks to series analysis * Update test_particle_analysis.py * Fix bugs * Update ParticleAnalysis.py * Added dbscan algorithm to clustering * Added preprocessing step to make sure all properties are on similar scales * Add additional clustering methods * Add local_size to loaded/saved parameters * Added additional properties * Updated docs and docstring * Update particle_analysis.rst * Update tests * Remove zone axis finding from codecov * Added docs and updated function to add any property Added documentation. Updated timeseriesanalysis function to inclue any property. * Update tests
Codecov Report
@@ Coverage Diff @@
## master #40 +/- ##
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- Coverage 73.01% 72.97% -0.04%
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Files 14 14
Lines 793 792 -1
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- Hits 579 578 -1
Misses 214 214
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