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I20251107-1800

I20251107-1800: Persist nested classes in .api_description
@Copilot Copilot tagged this 07 Nov 16:46 
The issue was that TypeNode.persistXML and PackageNode.persistXML only
persisted nodes with API visibility, filtering out non-API types even
if they had restrictions like @noreference.

Added shouldPersist() method to check if a node or its descendants
should be persisted based on API visibility OR restrictions, ensuring
nested types with @noreference are included in .api_description file.

Fix https://github.com/eclipse-pde/eclipse.pde/issues/1949

Co-authored-by: laeubi <1331477+laeubi@users.noreply.github.com>
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