Full Documentation

This page shows a full documentation on all the functions of this repository. With the tools from this repository you can re-create the plots of Gothe et al. paper:

and also use them to analyze your own data!

Gene metaplots:

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Correlation between double strand breaks and genomic / epigenetic / regulatory features:

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Heatmaps of genomic / epigenetic and regulatory features ordered by double strand break intensity:

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Correlation between expression, double strand breaks and chromatin conformation:

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Double strand breaks behavior at chromatin loops:

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Further help, comments, questions and bug report

For further help, comments, questions and reporting any bug in the code, please send an email to the bioinformatician in charge of this repository:

Dr. Eduardo Gade Gusmao eduardogade@gmail.com