ModelOps Examples

Examples demonstrating ModelOps/Calabaria workflows for different modeling frameworks.

Prerequisites

Before running any example, ensure you have:

1. Azure CLI installed and authenticated

   az login

2. ModelOps initialized

   mops init

3. Infrastructure running (if using cloud execution)

   mops infra up

Examples

emodlib-demo

EMOD malaria model calibration using prevalence-by-age targets with KL divergence loss.

General Workflow

Each example follows a similar pattern:

cd <example-name>

# 1. Install dependencies
uv sync

# 2. Register models and targets
mops bundle register-model models/<model>.py
mops bundle register-target targets/<target>.py

# 3. Generate study
# (using calabaria sampling commands)

# 4. Push bundle
mops bundle push

# 5. Submit job
mops jobs submit study.json

See individual example README files for specific commands.