Gemini Fixes After Merge (metadata.json & active agent)

[peyton-alt]

Note

Aligns transcript position tracking across agents and improves Gemini support.

• Replace transcript_uuid_* with transcript_identifier_* across state, strategy, checkpoint options/metadata, and hooks; persisted in metadata.json
• Update Claude and Gemini hooks to source AgentType from the current hook agent (authoritative) and pass transcript identifier + line/message counts to strategies
• Gemini: add id to GeminiMessage and new helpers GetLastMessageID*; capture last message ID in pre-prompt state; compute token usage from startMessageIndex
• Auto/manual strategies propagate new fields and (auto-commit) now records files_touched
• Tests added/updated for new Gemini ID APIs and state fields; remove unused docs/color.md

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[Copilot]

Pull request overview

This pull request fixes missing fields in the Gemini CLI's SaveContext when creating checkpoints. The changes ensure that Gemini sessions properly track transcript position and token usage, bringing parity with Claude Code's checkpoint metadata.

Changes:

• Added message ID tracking to Gemini transcripts for checkpoint position tracking
• Populated previously missing SaveContext fields (AgentType, TranscriptLinesAtStart, TranscriptUUIDAtStart, TokenUsage) in Gemini hook handlers
• Updated checkpoint metadata comment documentation
• Removed an unrelated test file (docs/color.md)

Reviewed changes

Copilot reviewed 5 out of 5 changed files in this pull request and generated 4 comments.

Show a summary per file

File	Description
docs/color.md	Deleted test documentation file (appears unrelated to PR purpose)
cmd/entire/cli/state.go	Added lastMessageID extraction from Gemini JSON transcripts in CaptureGeminiPrePromptState
cmd/entire/cli/hooks_geminicli_handlers.go	Populated missing SaveContext fields: AgentType, TranscriptLinesAtStart, TranscriptUUIDAtStart, TokenUsage with proper type conversion
cmd/entire/cli/checkpoint/checkpoint.go	Updated comments for TranscriptUUIDAtStart and TranscriptLinesAtStart fields; removed omitempty from TranscriptLinesAtStart JSON tag
cmd/entire/cli/agent/geminicli/transcript.go	Added ID field to GeminiMessage struct; implemented GetLastMessageID* functions for message ID extraction

[Copilot]

Pull request overview

Copilot reviewed 8 out of 8 changed files in this pull request and generated 2 comments.

[Copilot]

Pull request overview

Copilot reviewed 8 out of 8 changed files in this pull request and generated no new comments.

[Copilot]

Pull request overview

Copilot reviewed 8 out of 8 changed files in this pull request and generated 4 comments.

[Copilot]

Pull request overview

Copilot reviewed 8 out of 8 changed files in this pull request and generated no new comments.

[Copilot]

Pull request overview

Copilot reviewed 17 out of 17 changed files in this pull request and generated 3 comments.

[Copilot]

Pull request overview

Copilot reviewed 17 out of 17 changed files in this pull request and generated 2 comments.

[cursor]

Cursor Bugbot has reviewed your changes and found 1 potential issue.

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