06_PROFILES

Profiling completed on SAGA

# 1. I created a template shell script to base all the rest on.
profile_temp.sh

# 2. Create subdirectories to hold all the profiles
for i in `cat AMOR_2020_Good`; 
  do mkdir ${i};
done

# 3. Next I populate subfolders with the child bash scripts based on the template
./Make_child_scripts_indivprofiles.sh

# 4. Then run the script that recursively submits the jobs.I decided to divide the 
# list of samples into 5 parts and run them with fewer at once, just to know that if
# I needed to adjust any parameters, I would be wasting fewer resources.
./Submit_slurms_indivprofile.sh