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eolesin edited this page Aug 11, 2022 · 24 revisions

Welcome to the AMOR_Indiv_Assembly_Protocol wiki!

ISME18

Supporting Figures

Figure 1. PCA of 16s rRNA reads. Data was additive logratio transformed before principle component analysis was performed.

Figure 2. Venn diagram of the overlap of presence of metagenome assembled genomes (MAGs) between hydrothermal vents along the Arctic Mid-Ocean Ridge (AMOR). Presence of a MAG was determined using an arbitrary genome coverage cutoff value of 0.25 after testing of several more arbitrarily-chosen cutoffs (10,1,0.25,0.1,0.001).

Figure 3. Seven MAGs belonging to the lineage Methylococcales represent the lineage with the most genomes out of the 28 genomes deemed present among all 5 AMOR vent sites. Additive log ratios of these MAG coverages are visualized to demonstrate beta diversity of these 7 MAGs.

Methods Synopsis

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