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eolesin edited this page Aug 11, 2022
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Welcome to the AMOR_Indiv_Assembly_Protocol wiki!
https://github.com/eolesin/AMOR_Indiv_Assembly_Protocol/blob/a5aa962a5fcd5acfce820e16e3c30817095573e9/PCA_logratio.png Figure 1. PCA of 16s rRNA reads. Data was additive logratio transformed before principle component analysis was performed.
https://github.com/eolesin/AMOR_Indiv_Assembly_Protocol/blob/324bfb83bf1ba3ea1fa14be8a91ec9a08f295553/Venn1.png Figure 2. Venn diagram of the overlap of presence of MAGs between hydrothermal vents along the Arctic Mid-Ocean Ridge. Presence of a MAG was determined using an arbitrary genome coverage cutoff value of 0.25 after testing of several more arbitrarily-chosen cutoffs (10,1,0.25,0.1,0.001).
