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DNA Methylation-Driven Gene-Based Drug Response Prediction Model for Liver Cancer: The Critical Role of GLS

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1.差异
1.差异
 
 
2.merge
2.merge
 
 
3.甲基化
3.甲基化
 
 
4.热图
4.热图
 
 
5.TCGA临床合并
5.TCGA临床合并
 
 
DCA and immune analysis
DCA and immune analysis
 
 
6最终结果
6最终结果
 
 
C-index.pdf
C-index.pdf
 
 
CIBERSORT-Results.txt
CIBERSORT-Results.txt
 
 
DNAss.cor.pdf
DNAss.cor.pdf
 
 
DrugPredictions.csv
DrugPredictions.csv
 
 
GDSC2_Res.rds
GDSC2_Res.rds
 
 
GSEA.highrisk.pdf
GSEA.highrisk.pdf
 
 
GSEA.lowrisk.pdf
GSEA.lowrisk.pdf
 
 
GSEA.result.txt
GSEA.result.txt
 
 
GSVAcor.pdf
GSVAcor.pdf
 
 
Gene24.TMEvioplot.R
Gene24.TMEvioplot.R
 
 
Gene25.CIBERSORT.R
Gene25.CIBERSORT.R
 
 
Gene25.run.R
Gene25.run.R
 
 
Gene26.geneImmune.R
Gene26.geneImmune.R
 
 
Gene27.Lollipop.R
Gene27.Lollipop.R
 
 
Gene28.checkpoint.R
Gene28.checkpoint.R
 
 
Gene31.TCIA.R
Gene31.TCIA.R
 
 
Hallmark.gmt
Hallmark.gmt
 
 
KEGG.gmt
KEGG.gmt
 
 
Lollipop.pdf
Lollipop.pdf
 
 
MET.cancer.txt
MET.cancer.txt
 
 
Necroptosis28.estimate.R
Necroptosis28.estimate.R
 
 
RNAss.cor.pdf
RNAss.cor.pdf
 
 
ROC.GEO.pdf
ROC.GEO.pdf
 
 
ROC.TCGA.pdf
ROC.TCGA.pdf
 
 
StemnessScores_DNAmeth_20170210.tsv
StemnessScores_DNAmeth_20170210.tsv
 
 
StemnessScores_RNAexp_20170127.2.tsv
StemnessScores_RNAexp_20170127.2.tsv
 
 
Survival.GLS.pdf
Survival.GLS.pdf
 
 
Survival.GNA14.pdf
Survival.GNA14.pdf
 
 
Survival.GNG4.pdf
Survival.GNG4.pdf
 
 
TCIA-ClinicalData.tsv
TCIA-ClinicalData.tsv
 
 
TCIA.txt
TCIA.txt
 
 
TMEscores.txt
TMEscores.txt
 
 
c2.cp.kegg.symbols.gmt
c2.cp.kegg.symbols.gmt
 
 
c5.go.symbols.gmt
c5.go.symbols.gmt
 
 
calibration.pdf
calibration.pdf
 
 
can-GLS .png
can-GLS .png
 
 
can-GNA14 .png
can-GNA14 .png
 
 
clinical.txt
clinical.txt
 
 
clinical.xls
clinical.xls
 
 
cor.B cells memory.pdf
cor.B cells memory.pdf
 
 
cor.B cells naive.pdf
cor.B cells naive.pdf
 
 
cor.Eosinophils.pdf
cor.Eosinophils.pdf
 
 
cor.Macrophages M0.pdf
cor.Macrophages M0.pdf
 
 
cor.Macrophages M2.pdf
cor.Macrophages M2.pdf
 
 
cor.Mast cells resting.pdf
cor.Mast cells resting.pdf
 
 
cor.Plasma cells.pdf
cor.Plasma cells.pdf
 
 
cor.T cells CD8.pdf
cor.T cells CD8.pdf
 
 
cor.T cells follicular helper.pdf
cor.T cells follicular helper.pdf
 
 
cor.T cells gamma delta.pdf
cor.T cells gamma delta.pdf
 
 
cor.T cells regulatory (Tregs).pdf
cor.T cells regulatory (Tregs).pdf
 
 
cor.result.txt
cor.result.txt
 
 
corResult.txt
corResult.txt
 
 
corpot1.pdf
corpot1.pdf
 
 
corpot2.pdf
corpot2.pdf
 
 
coxTest.lasso.R
coxTest.lasso.R
 
 
coxTest.multiCox.R
coxTest.multiCox.R
 
 
coxTest.survial.R
coxTest.survial.R
 
 
coxTest.trainTest.R
coxTest.trainTest.R
 
 
cvfit.pdf
cvfit.pdf
 
 
drugSenstivity.5-Fluorouracil.pdf
drugSenstivity.5-Fluorouracil.pdf
 
 
drugSenstivity.ABT737.pdf
drugSenstivity.ABT737.pdf
 
 
drugSenstivity.AT13148.pdf
drugSenstivity.AT13148.pdf
 
 
drugSenstivity.AZD1208.pdf
drugSenstivity.AZD1208.pdf
 
 
drugSenstivity.AZD1332.pdf
drugSenstivity.AZD1332.pdf
 
 
drugSenstivity.AZD2014.pdf
drugSenstivity.AZD2014.pdf
 
 
drugSenstivity.AZD5153.pdf
drugSenstivity.AZD5153.pdf
 
 
drugSenstivity.AZD6482.pdf
drugSenstivity.AZD6482.pdf
 
 
drugSenstivity.AZD7762.pdf
drugSenstivity.AZD7762.pdf
 
 
drugSenstivity.Afatinib.pdf
drugSenstivity.Afatinib.pdf
 
 
drugSenstivity.Axitinib.pdf
drugSenstivity.Axitinib.pdf
 
 
drugSenstivity.Daporinad.pdf
drugSenstivity.Daporinad.pdf
 
 
drugSenstivity.Dasatinib.pdf
drugSenstivity.Dasatinib.pdf
 
 
drugSenstivity.Dihydrorotenone.pdf
drugSenstivity.Dihydrorotenone.pdf
 
 
drugSenstivity.Docetaxel.pdf
drugSenstivity.Docetaxel.pdf
 
 
drugSenstivity.Doramapimod.pdf
drugSenstivity.Doramapimod.pdf
 
 
drugSenstivity.Entinostat.pdf
drugSenstivity.Entinostat.pdf
 
 
drugSenstivity.Entospletinib.pdf
drugSenstivity.Entospletinib.pdf
 
 
drugSenstivity.Fludarabine.pdf
drugSenstivity.Fludarabine.pdf
 
 
drugSenstivity.Fulvestrant.pdf
drugSenstivity.Fulvestrant.pdf
 
 
drugSenstivity.GDC0810.pdf
drugSenstivity.GDC0810.pdf
 
 
drugSenstivity.GNE-317.pdf
drugSenstivity.GNE-317.pdf
 
 
drugSenstivity.GSK2606414.pdf
drugSenstivity.GSK2606414.pdf
 
 
drugSenstivity.GSK269962A.pdf
drugSenstivity.GSK269962A.pdf
 
 
drugSenstivity.Gefitinib.pdf
drugSenstivity.Gefitinib.pdf
 
 
drugSenstivity.Gemcitabine.pdf
drugSenstivity.Gemcitabine.pdf
 
 
drugSenstivity.I-BET-762.pdf
drugSenstivity.I-BET-762.pdf
 
 
drugSenstivity.I-BRD9.pdf
drugSenstivity.I-BRD9.pdf
 
 
drugSenstivity.IGF1R_3801.pdf
drugSenstivity.IGF1R_3801.pdf
 
 
drugSenstivity.IRAK4_4710.pdf
drugSenstivity.IRAK4_4710.pdf
 
 
drugSenstivity.Ipatasertib.pdf
drugSenstivity.Ipatasertib.pdf
 
 
drugSenstivity.Irinotecan.pdf
drugSenstivity.Irinotecan.pdf
 
 
drugSenstivity.JAK1_8709.pdf
drugSenstivity.JAK1_8709.pdf
 
 
drugSenstivity.JAK_8517.pdf
drugSenstivity.JAK_8517.pdf
 
 

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DNA Methylation-Driven Gene-Based Drug Response Prediction Model for Liver Cancer: The Critical Role of GLS

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