Enhances CLI tool with modern prompts, Refactor commands to use commander

[genesiscz]

Migrates CLI tools to use @inquirer/prompts and Commander:

• Replaces Enquirer and minimist for modern UI
• Commander enables subcommands and more flexible option parsing
• Improves maintainability and user experience

relates to CLI framework modernization

Summary by CodeRabbit

• New Features

  • Git Rebase Multiple: safe multi-branch rebase with backups, fork-point tracking, dry‑run/abort/continue and full rollback.
  • GitHub CLI: new issue/pr/comments/search commands with caching and AI/MD/JSON outputs.
  • React Compiler Debug tool; TMux quick reference guide.

• Improvements

  • Claude Code Plugin: README entry and quick start.
  • Unified, modernized CLI UX: searchable prompts, non‑interactive flags and clearer confirmations.
  • Dashboard: new “cyber” styling and theme updates.

• Documentation

  • Expanded README, tool guides, examples and navigation.

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