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Preprocessing-gene-expression-data

  1. Foldchange thresholding.ipynb : This program separates upregulated and downregulated genes according to the given fold change values

  2. Principal component analysis.ipynb : For the dimensionality reduction of gene expression values and select independent features in the data

  3. ReadFormats.ipynb : This jupyter notebook is useful to read different formats associated with biological data

Python Modules: Pandas, scikit-learn, Bio.Affy

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