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fix: pass GH_AW_SAFE_OUTPUTS to safe-outputs MCP HTTP server startup step#24126

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pelikhan merged 3 commits intomainfrom
copilot/fix-empty-outputs-jsonl
Apr 2, 2026
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fix: pass GH_AW_SAFE_OUTPUTS to safe-outputs MCP HTTP server startup step#24126
pelikhan merged 3 commits intomainfrom
copilot/fix-empty-outputs-jsonl

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Copilot AI commented Apr 2, 2026

The safe-outputs MCP HTTP server was returning {"result":"success"} to tool calls but never persisting items to outputs.jsonl, causing agent_output.json to be {"items":[]} and all downstream safe-output jobs to be skipped.

Root Cause

The "Start Safe Outputs MCP HTTP Server" step in compiled workflow YAML was missing GH_AW_SAFE_OUTPUTS from its env: block. The Node.js server process fell back to constructing the output path from process.env.RUNNER_TEMP (hardcoded default in safe_outputs_config.cjs), but RUNNER_TEMP is not automatically exported to background processes started from a GitHub Actions run: block — so writes silently succeeded to the wrong path while ingestion steps read from ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }}.

Changes Made

  • pkg/workflow/mcp_setup_generator.go: Added GH_AW_SAFE_OUTPUTS: ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }} to the "Start Safe Outputs MCP HTTP Server" step's env: block and export GH_AW_SAFE_OUTPUTS to its run: script, matching the pattern used by every other step that consumes this variable.
  • pkg/workflow/mcp_setup_generator_test.go: Added regression test TestSafeOutputsHTTPServerPassesOutputEnvVar that compiles a workflow with safe-outputs and asserts GH_AW_SAFE_OUTPUTS is present in the startup step's env block.
  • All 179 .lock.yml workflow files recompiled via make recompile.

Testing

  • ✅ New regression test TestSafeOutputsHTTPServerPassesOutputEnvVar passes
  • ✅ All unit tests pass (go test ./pkg/workflow/)
  • ✅ All 179 workflow lock files recompiled successfully
  • ✅ Lint passes

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pelikhan commented Apr 2, 2026

@copilot keep working

The safe-outputs HTTP server was not receiving the GH_AW_SAFE_OUTPUTS
environment variable, causing it to fall back to constructing the
outputs.jsonl path from process.env.RUNNER_TEMP instead of using the
exact path established by the set-runtime-paths step.

This meant tool calls returned {"result":"success"} but wrote to a path
that downstream ingestion steps were not reading from, resulting in an
empty agent_output.json.

Fix: add GH_AW_SAFE_OUTPUTS to the "Start Safe Outputs MCP HTTP Server"
step env block (and export list) so the Node.js server process inherits
the correct file path that all other steps agree on.

Also adds a regression test TestSafeOutputsHTTPServerPassesOutputEnvVar
in mcp_setup_generator_test.go and recompiles all 179 workflow lock files.

Agent-Logs-Url: https://github.com/github/gh-aw/sessions/49174482-0622-414b-a819-bfdfa874b971

Co-authored-by: pelikhan <4175913+pelikhan@users.noreply.github.com>
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Copilot AI commented Apr 2, 2026

@copilot keep working

Done. Committed in 6582b4f.

Root cause: The "Start Safe Outputs MCP HTTP Server" step was missing GH_AW_SAFE_OUTPUTS in its env block. The Node.js server process fell back to ${process.env.RUNNER_TEMP}/gh-aw/safeoutputs/outputs.jsonl (hardcoded default in safe_outputs_config.cjs) but RUNNER_TEMP wasn't exported to the subprocess, so the path was empty — writes silently succeeded to /gh-aw/safeoutputs/outputs.jsonl while ingestion read from ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }}.

Fix: Added GH_AW_SAFE_OUTPUTS: ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }} and export GH_AW_SAFE_OUTPUTS to the startup step in pkg/workflow/mcp_setup_generator.go, recompiled all 179 lock files, and added a regression test TestSafeOutputsHTTPServerPassesOutputEnvVar.

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Copilot AI changed the title [WIP] Fix issue with empty outputs.jsonl in MCP server fix: pass GH_AW_SAFE_OUTPUTS to safe-outputs MCP HTTP server startup step Apr 2, 2026
@pelikhan pelikhan marked this pull request as ready for review April 2, 2026 15:27
Copilot AI review requested due to automatic review settings April 2, 2026 15:27
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Pull request overview

This PR fixes safe-outputs persistence by ensuring the Safe Outputs MCP HTTP server process receives the GH_AW_SAFE_OUTPUTS path, so it writes outputs.jsonl to the same location that downstream ingestion reads from (preventing empty agent_output.json and skipped jobs).

Changes:

  • Pass GH_AW_SAFE_OUTPUTS into the “Start Safe Outputs MCP HTTP Server” step’s env: and export it in the step’s run: script.
  • Add a regression unit test asserting the compiled workflow includes the variable for the server startup step.
  • Recompile workflow lock files (*.lock.yml) to include the corrected env/export in generated workflows.

Reviewed changes

Copilot reviewed 175 out of 175 changed files in this pull request and generated 1 comment.

File Description
pkg/workflow/mcp_setup_generator.go Adds GH_AW_SAFE_OUTPUTS to the safe-outputs server startup step environment and exports it for the background Node process.
pkg/workflow/mcp_setup_generator_test.go Adds a regression test to catch missing GH_AW_SAFE_OUTPUTS wiring in generated YAML.
.github/workflows/*.lock.yml (recompiled) Updates compiled workflows so the safe-outputs MCP server startup step receives GH_AW_SAFE_OUTPUTS.

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Comment on lines +577 to +586
// Verify the "Start Safe Outputs MCP HTTP Server" step exists
assert.Contains(t, yamlStr, "Start Safe Outputs MCP HTTP Server",
"Should have safe outputs server startup step")

// The critical fix: GH_AW_SAFE_OUTPUTS must be in the startup step's env block
// so the Node.js server process writes outputs.jsonl to the exact path that the
// ingestion step reads from.
assert.Contains(t, yamlStr,
"GH_AW_SAFE_OUTPUTS: ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }}",
"Start Safe Outputs step must include GH_AW_SAFE_OUTPUTS in env block so the server writes to the correct path")
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The regression test currently asserts that GH_AW_SAFE_OUTPUTS: ${{ steps.set-runtime-paths.outputs.GH_AW_SAFE_OUTPUTS }} appears anywhere in the compiled YAML. That string is also present in other steps (e.g., output ingestion/copy steps), so this assertion can pass even if the Start Safe Outputs MCP HTTP Server step’s env: block is missing GH_AW_SAFE_OUTPUTS (and export GH_AW_SAFE_OUTPUTS alone would still fall back because an empty env var is falsy in Node). Consider tightening the test to scope the assertion to the startup step (e.g., extract just that step block and inspect its env: section, or use a regex anchored between the step name and its env: block).

Copilot uses AI. Check for mistakes.
@pelikhan pelikhan merged commit 4fee614 into main Apr 2, 2026
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@pelikhan pelikhan deleted the copilot/fix-empty-outputs-jsonl branch April 2, 2026 15:46
Copilot stopped work on behalf of pelikhan due to an error April 2, 2026 16:03
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Safe outputs MCP server returns success but outputs.jsonl is empty (v0.65.5)

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