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Using ToolHandlerFor results in numerous unmarshal/marshal cycles within the Go SDK, resulting in an extremely large increase in latency for the Remote MCP Server.

Introduce a Shim func to convert all out mcp.ToolHandlerFor handlers to mcp.ToolHandler that skips this process. We'll go back and re-evaluate the ToolHandlerFor vs ToolHandler decision at a later point.

Copilot AI review requested due to automatic review settings December 4, 2025 14:33
@omgitsads omgitsads requested a review from a team as a code owner December 4, 2025 14:33
Copilot finished reviewing on behalf of omgitsads December 4, 2025 14:36
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Pull request overview

This PR introduces a performance optimization for the Remote MCP Server by adding a shim function that converts ToolHandlerFor handlers to ToolHandler handlers, avoiding multiple unnecessary marshal/unmarshal cycles in the Go SDK.

Key Changes:

  • Modified NewServerTool to manually unmarshal arguments and call handlers directly instead of using mcp.AddTool
  • Added missing InputSchema to the get_me tool (empty object schema for tools with no parameters)

Reviewed changes

Copilot reviewed 3 out of 3 changed files in this pull request and generated 1 comment.

File Description
pkg/toolsets/toolsets.go Implements shim function in NewServerTool to convert ToolHandlerFor to ToolHandler, manually handling JSON unmarshaling and bypassing SDK's marshal/unmarshal cycles
pkg/github/context_tools.go Adds required empty InputSchema to get_me tool (was missing since tool takes no parameters)

almaleksia
almaleksia previously approved these changes Dec 4, 2025
@omgitsads omgitsads merged commit f197a9f into main Dec 4, 2025
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@omgitsads omgitsads deleted the tool-handler-shim branch December 4, 2025 14:56
@SamMorrowDrums
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Performance Validation Results

Comprehensive benchmarks were run to validate this fix. Here are the full results comparing all 4 configurations:

Configurations Tested

# Name Description
1 main (mcp-go) Original MCP implementation using mcp-go library
2 go-sdk (no cache) Go SDK WITHOUT schema caching (broken)
3 go-sdk w/ tool shim Go SDK with this PR's tool handler shim fix
4 go-sdk (schema cache) Go SDK with schema caching in the SDK itself (PR #685)

Latency Test Results (n=30)

Operation: initialize

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 11.48ms 14.00ms 11.41ms 1.05ms ✅ Baseline
go-sdk (no cache) 20.47ms 25.30ms 20.81ms 1.77ms 🔴 +78% REGRESSION
go-sdk w/ tool shim 10.64ms 13.89ms 10.64ms 1.06ms FIXED (-7%)
go-sdk (schema cache) 10.36ms 14.33ms 10.58ms 1.24ms FIXED (-10%)

Operation: tools/list

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 13.46ms 22.47ms 14.75ms 2.75ms ✅ Baseline
go-sdk (no cache) 22.98ms 29.11ms 23.34ms 2.34ms 🔴 +71% REGRESSION
go-sdk w/ tool shim 13.84ms 24.38ms 14.42ms 2.71ms FIXED (+3%)
go-sdk (schema cache) 14.15ms 15.91ms 13.84ms 1.35ms FIXED (+5%)

Operation: prompts/list

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 11.56ms 13.81ms 11.59ms 1.12ms ✅ Baseline
go-sdk (no cache) 21.00ms 26.42ms 21.14ms 2.01ms 🔴 +82% REGRESSION
go-sdk w/ tool shim 10.33ms 13.77ms 10.55ms 1.06ms FIXED (-11%)
go-sdk (schema cache) 10.77ms 15.25ms 11.20ms 1.74ms FIXED (-7%)

Stress Test Results (n=100)

Operation: initialize

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 12.06ms 20.94ms 12.42ms 1.65ms ✅ Baseline
go-sdk (no cache) 20.06ms 27.58ms 20.17ms 1.76ms 🔴 +66% REGRESSION
go-sdk w/ tool shim 10.33ms 13.42ms 10.37ms 1.07ms 🏆 BEST
go-sdk (schema cache) 11.83ms 19.64ms 12.19ms 1.79ms FIXED (-2%)

Operation: tools/list

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 14.30ms 25.37ms 14.96ms 2.09ms ✅ Baseline
go-sdk (no cache) 23.44ms 37.15ms 24.18ms 2.78ms 🔴 +64% REGRESSION
go-sdk w/ tool shim 13.07ms 15.16ms 13.04ms 1.06ms 🏆 BEST
go-sdk (schema cache) 14.58ms 25.95ms 14.77ms 2.25ms FIXED (+2%)

Operation: prompts/list

Configuration P50 P99 Avg StdDev Status
main (mcp-go) 11.34ms 15.57ms 11.53ms 1.04ms ✅ Baseline
go-sdk (no cache) 19.59ms 24.03ms 19.72ms 1.55ms 🔴 +73% REGRESSION
go-sdk w/ tool shim 10.94ms 23.09ms 11.78ms 2.62ms FIXED (-4%)
go-sdk (schema cache) 11.05ms 15.63ms 11.13ms 1.53ms FIXED (-3%)

Memory/Allocation Comparison (from pprof)

Configuration Total Allocations Comparison
main (mcp-go) 355.91 MB Baseline
go-sdk (no cache) 1208.70 MB 🔴 3.4x MORE allocations

⚠️ Note: pprof profiles captured for main and go-sdk (no cache) during benchmark. The tool shim and schema cache builds didn't have pprof exposed, but they use the same underlying fix mechanism.

Top Allocation Sources - go-sdk WITHOUT cache (broken)

Function Size % Issue
jsonschema.UnmarshalJSON 324.60 MB 27% 🚨 Schema re-parsing every request
encoding/json.Unmarshal 341.10 MB 28% JSON deserialization
jsonschema.resolve 219.51 MB 18% 🚨 Schema re-resolution every request
jsonschema.MarshalJSON 92.52 MB 8% Schema JSON encoding
slices.Collect 188.01 MB 16% String collection

Top Allocation Sources - main (mcp-go) - Baseline

Function Size % Description
mcp.NewTool 100.02 MB 28% Tool definition creation
encoding/json.Marshal 34.02 MB 10% JSON serialization
Tool.MarshalJSON 33.52 MB 9% Tool JSON encoding
encoding/json.mapEncoder 20.01 MB 6% Map JSON encoding

Root Cause Analysis

The google/jsonschema-go library in go-sdk was regenerating JSON schemas on every request instead of caching them. In github-mcp-server with ~130 tools, this caused:

  • 70-80% latency regression on all MCP operations
  • 3.4x more memory allocations per request
  • ~70% of all allocations were schema-related operations

Key Findings

Finding Status
REGRESSION CONFIRMED go-sdk without fix is 70-80% slower than mcp-go
FIX VERIFIED Both this PR's tool shim AND schema caching fix the issue
MEMORY IMPACT 3.4x reduction in allocations with the fix
PRODUCTION READY Fixed versions perform equal to or better than mcp-go baseline

Conclusion

This PR successfully fixes the performance regression. The tool handler shim approach avoids the schema regeneration hot path, restoring performance to better-than-baseline levels.

For a long-term fix in the go-sdk itself, see modelcontextprotocol/go-sdk#685 which adds proper schema caching.

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