Pubmed API Usage

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Fatma Sena Arpinar edited this page Dec 3, 2025 · 3 revisions

Getting Publications with PMID

URL: https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=xml&id=<pubmed_id>
Method: GET
Response: XML
Documentation is here

Getting publications with DOI

URL: https://doi.org/<DOI>
Method: GET
Headers: Accept: application/vnd.citationstyles.csl+json
Response: JSON

Projects

GlyTableMaker

PubmedUtil.java
DOIUtil.java
Web Services:
- api/util/getpublication
- api/dataset/updatedataset