-
Notifications
You must be signed in to change notification settings - Fork 0
Open
Description
Hi, thanks for this great tool. I got a error when I call TRESS_DMRfit function for differential peak analysis, here is the error information:
DMR.fit = TRESS_DMRfit(IP.file = IP.file,
Input.file = Input.file,
Path_To_AnnoSqlite = Path_sqlit,
variable = variable,
model = model,
InputDir = InputDir,
OutputDir = OutputDir,
experimentName = "DOXvsDMSO")
##### Divid the genome into bins and obtain bin counts...
Time used to obtain bin-level data is:
9.763366
##### Step 1: Call candidate DMRs...
Merge bumps from different replicates...
The number of candidates is:
47020
Time used in Step 1 is:
1.88935
##### Step 2: Model fitting on candidates...
[1] "Start to estimate preliminary MLE ..."
Error in mclapply(seq_len(nrow(Ratio)), iMLE, X, Y, sx, sy, Ratio, D, :
Windows不支持'mc.cores' > 1
In addition: Warning message:
In .merge_two_Seqinfo_objects(x, y) :
Each of the 2 combined objects has sequence levels not in the other:
- in 'x': GL456210.1, GL456211.1, JH584296.1
- in 'y': MT, JH584297.1
Make sure to always combine/compare objects based on the same reference
genome (use suppressWarnings() to suppress this warning).Thanks for your help!
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
No labels