Can't use pip install iced

[sunsetprayer1965]

219: _Warning: Package 'iced.tests' is absent from the packages configuration.
!!

          ********************************************************************************
          ############################
          # Package would be ignored #
          ############################
          Python recognizes 'iced.tests' as an importable package[^1],
          but it is absent from setuptools' `packages` configuration.

          This leads to an ambiguous overall configuration. If you want to distribute this
          package, please make sure that 'iced.tests' is explicitly added
          to the `packages` configuration field.

          Alternatively, you can also rely on setuptools' discovery methods
          (for example by using `find_namespace_packages(...)`/`find_namespace:`
          instead of `find_packages(...)`/`find:`).

          You can read more about "package discovery" on setuptools documentation page:

          - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

          If you don't want 'iced.tests' to be distributed and are
          already explicitly excluding 'iced.tests' via
          `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
          you can try to use `exclude_package_data`, or `include-package-data=False` in
          combination with a more fine grained `package-data` configuration.

          You can read more about "package data files" on setuptools documentation page:

          - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


          [^1]: For Python, any directory (with suitable naming) can be imported,
                even if it does not contain any `.py` files.
                On the other hand, currently there is no concept of package data
                directory, all directories are treated like packages.
          ********************************************************************************

  !!
    check.warn(importable)
  C:\Users\weilu\AppData\Local\Temp\pip-build-env-esjqlwnb\overlay\Lib\site-packages\setuptools\command\build_py.py:219: _Warning: Package 'iced.utils.tests' is absent from the `packages` configuration.
  !!

          ********************************************************************************
          ############################
          # Package would be ignored #
          ############################
          Python recognizes 'iced.utils.tests' as an importable package[^1],
          but it is absent from setuptools' `packages` configuration.

          This leads to an ambiguous overall configuration. If you want to distribute this
          package, please make sure that 'iced.utils.tests' is explicitly added
          to the `packages` configuration field.

          Alternatively, you can also rely on setuptools' discovery methods
          (for example by using `find_namespace_packages(...)`/`find_namespace:`
          instead of `find_packages(...)`/`find:`).

          You can read more about "package discovery" on setuptools documentation page:

          - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

          If you don't want 'iced.utils.tests' to be distributed and are
          already explicitly excluding 'iced.utils.tests' via
          `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
          you can try to use `exclude_package_data`, or `include-package-data=False` in
          combination with a more fine grained `package-data` configuration.

          You can read more about "package data files" on setuptools documentation page:

          - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


          [^1]: For Python, any directory (with suitable naming) can be imported,
                even if it does not contain any `.py` files.
                On the other hand, currently there is no concept of package data
                directory, all directories are treated like packages.
          ********************************************************************************

  !!
    check.warn(importable)
  copying iced\_filter_.c -> build\lib.win-amd64-cpython-39\iced
  copying iced\_filter_.pyx -> build\lib.win-amd64-cpython-39\iced
  copying iced\normalization\_normalization_.pyx -> build\lib.win-amd64-cpython-39\iced\normalization
  creating build\lib.win-amd64-cpython-39\iced\tests
  copying iced\tests\test_filter.py -> build\lib.win-amd64-cpython-39\iced\tests
  creating build\lib.win-amd64-cpython-39\iced\datasets\data\duan2009
  copying iced\datasets\data\duan2009\duan.SC.10000.raw_sub.bed -> build\lib.win-amd64-cpython-39\iced\datasets\data\duan2009
  copying iced\datasets\data\duan2009\duan.SC.10000.raw_sub.matrix -> build\lib.win-amd64-cpython-39\iced\datasets\data\duan2009
  creating build\lib.win-amd64-cpython-39\iced\datasets\data\servant2018
  copying iced\datasets\data\servant2018\simulation_3.bed -> build\lib.win-amd64-cpython-39\iced\datasets\data\servant2018
  copying iced\datasets\data\servant2018\simulation_3.mat -> build\lib.win-amd64-cpython-39\iced\datasets\data\servant2018
  creating build\lib.win-amd64-cpython-39\iced\datasets\tests
  copying iced\datasets\tests\test_base.py -> build\lib.win-amd64-cpython-39\iced\datasets\tests
  creating build\lib.win-amd64-cpython-39\iced\io\tests
  copying iced\io\tests\test_io.py -> build\lib.win-amd64-cpython-39\iced\io\tests
  copying iced\normalization\_normalization_.c -> build\lib.win-amd64-cpython-39\iced\normalization
  creating build\lib.win-amd64-cpython-39\iced\normalization\tests
  copying iced\normalization\tests\test_ca_utils.py -> build\lib.win-amd64-cpython-39\iced\normalization\tests
  copying iced\normalization\tests\test_normalization.py -> build\lib.win-amd64-cpython-39\iced\normalization\tests
  creating build\lib.win-amd64-cpython-39\iced\random\tests
  copying iced\random\tests\test_init.py -> build\lib.win-amd64-cpython-39\iced\random\tests
  creating build\lib.win-amd64-cpython-39\iced\utils\tests
  copying iced\utils\tests\test_genome.py -> build\lib.win-amd64-cpython-39\iced\utils\tests
  copying iced\utils\tests\test_validation.py -> build\lib.win-amd64-cpython-39\iced\utils\tests
  running build_ext
  building 'iced._filter_' extension
  creating build\temp.win-amd64-cpython-39\Release\iced
  "C:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.42.34433\bin\HostX86\x64\cl.exe" /c /nologo /O2 /W3 /GL /DNDEBUG /MD -IC:\Users\weilu\AppData\Local\Temp\pip-build-env-esjqlwnb\overlay\Lib\site-packages\numpy\_core\include -IC:\Users\weilu\miniconda3\envs\pastis_env\include -IC:\Users\weilu\miniconda3\envs\pastis_env\Include "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.42.34433\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Tools\MSVC\14.42.34433\ATLMFC\include" "-IC:\Program Files\Microsoft Visual Studio\2022\Community\VC\Auxiliary\VS\include" "-IC:\Program Files (x86)\Windows Kits\10\include\10.0.22621.0\ucrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\um" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\shared" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\winrt" "-IC:\Program Files (x86)\Windows Kits\10\\include\10.0.22621.0\\cppwinrt" "-IC:\Program Files (x86)\Windows Kits\NETFXSDK\4.8\include\um" /Tciced/_filter_.c /Fobuild\temp.win-amd64-cpython-39\Release\iced/_filter_.obj
  _filter_.c
  C:\Users\weilu\AppData\Local\Temp\pip-build-env-esjqlwnb\overlay\Lib\site-packages\numpy\_core\include\numpy\npy_1_7_deprecated_api.h(14) : Warning Msg: Using deprecated NumPy API, disable it with #define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION
  iced/_filter_.c(3498): error C2039: "subarray": 不是 "_PyArray_Descr" 的成员
  C:\Users\weilu\AppData\Local\Temp\pip-build-env-esjqlwnb\overlay\Lib\site-packages\numpy\_core\include\numpy\ndarraytypes.h(618): note: 参见“_PyArray_Descr”的声明
  iced/_filter_.c(3498): error C2198: “void _Py_INCREF(PyObject *)”: 用于调用的参数太少
  iced/_filter_.c(3499): error C2039: "subarray": 不是 "_PyArray_Descr" 的成员
  C:\Users\weilu\AppData\Local\Temp\pip-build-env-esjqlwnb\overlay\Lib\site-packages\numpy\_core\include\numpy\ndarraytypes.h(618): note: 参见“_PyArray_Descr”的声明
  iced/_filter_.c(4574): warning C4018: “>=”: 有符号/无符号不匹配
  error: command 'C:\\Program Files\\Microsoft Visual Studio\\2022\\Community\\VC\\Tools\\MSVC\\14.42.34433\\bin\\HostX86\\x64\\cl.exe' failed with exit code 2
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for iced
Failed to build iced
ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (iced)

I struggle with this problem for three days... How should I solve it? thank you

[e-coral]

I'm getting really stuck on this, too. Did you manage to resolve this issue?

[NelleV]

Hello,
Sorry for the late reply! Try installing the github version instead. I made some fixes there that I did not release yet.
(I'll do a release in the next couple of weeks).
Thanks,
Nelle

[e-coral]

Thanks @NelleV!

I actually managed to install via conda just before you posted this. For anyone wanting to try that way, I had to install some missing libraries to prevent errors, and then

conda install -c conda-forge -c bioconda iced

worked for me