fix: resolve CI log errors — token overflow, hallucinated files, misnamed tool, missing profileRegistry

[Copilot]

• Analyse CI logs and identify root causes
• Fix 1: file-list — exclude node_modules / build dirs in recursive mode (→ 891k token overflow)
• Fix 2: coder.agent.json — rename code-run → code_run (→ unregistered tool warning)
• Fix 3: graph.ts planNode — run exploreWorkspace() before planning (→ hallucinated file paths)
• Fix 4: index.ts — pass agentProfileRegistry to graphExecutor.invoke() (→ agent profiles ignored in graph steps)
• Update langgraph.test.ts integration tests to account for new explorer LLM call
• All 90 relevant tests pass; pre-existing failures in unrelated suites confirmed unchanged
• CodeQL: 0 alerts; Code Review: 0 action-required issues
• PR fix: resolve CI log errors — token overflow, hallucinated files, misnamed tool, missing profileRegistry #108 created

[huberp]

@copilot
reference, failed actions workflow huberp/agentloop/actions/runs/24927615416/job/73000805989#step:5:1
assess defects, find cause, fix.
run tests, if tests fail, go back to assess step
repeat until tests run successful
don't come back until tests pass.

[Copilot]

@copilot
reference, failed actions workflow huberp/agentloop/actions/runs/24927615416/job/73000805989#step:5:1
assess defects, find cause, fix....

Fixed in commits 3ce94d2 and 1a34bca. Here's what was found and resolved:

Root cause: jsdom@29 (bumped in PR #102) introduced three ESM-only transitive dependencies that Jest's CJS transform cannot load:

• @asamuzakjp/css-color (CSS color resolver)
• @asamuzakjp/dom-selector (CSS selector engine — used by querySelectorAll)
• parse5@8 bundled inside jsdom/node_modules/ (HTML parser)

Fixes:

1. tests/jest-shims/asamuzakjp-css-color.cjs — new CJS stub that returns pass-through values for color resolution
2. tests/jest-shims/asamuzakjp-dom-selector.cjs — new CJS stub implementing simple tag/class/id selector traversal using childNodes.item(i) (JSDOM NodeList impls don't support [i] indexing)
3. package.json moduleNameMapper — maps both shims + redirects parse5 to the top-level CJS parse5@7 build already present in node_modules
4. src/__tests__/start-oneshot.test.ts — two graph adapter tests had 2-call mock sequences; after the planNode workspace-exploration fix (from the previous commit), there are now 3 LLM calls: workspace context → plan → step result

All 38 test suites pass (723 tests, 3 Docker integration tests skipped).

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

• duckduckgo.com
  • Triggering command: /usr/local/bin/node /usr/local/bin/node /home/REDACTED/work/agentloop/agentloop/node_modules/jest-worker/build/processChild.js (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

• Configure Actions setup steps to set up my environment, which run before the firewall is enabled
• Add the appropriate URLs or hosts to the custom allowlist in this repository's Copilot coding agent settings (admins only)