pyribs 0.9.0

To learn about this release, see our page on What's New in v0.9.0:
https://docs.pyribs.org/en/stable/whats-new.html

Changelog

API

• Add replace parameter to sample_elites in archives (#682)
• Require numpy to be at least 2.0.0 (#681)
• Allow specifying centroids with filenames in CVTArchive (#679)
• Add kdtree_query_kwargs parameter to CVTArchive (#677)
• Backwards-incompatible: Replace ckdtree_kwargs with kdtree_kwargs in
  CVTArchive and ProximityArchive (#676)
• Add sklearn_nn as an option for nearest_neighbors in CVTArchive
  (#675)
• Backwards-incompatible: Replace use_kd_tree with nearest_neighbors in
  CVTArchive (#674)
• Drop Python 3.9 support and add 3.14 support (#672)
• Separate centroid generation from init in CVTArchive (#663)
  • Backwards-incompatible: Replace the cells and custom_centroids
    parameters with a new centroids parameter in CVTArchive
  • Backwards-incompatible: Remove the samples property from CVTArchive
  • Backwards-incompatible: Remove plot_samples from cvt_archive_heatmap
    and cvt_archive_3d_plot
• Add k_means_centroids function (#665)
• Backwards-incompatible: Remove centroid_method from CVTArchive
  (#662)
• Support multi-dimensional solutions in GaussianEmitter and IsoLineEmitter
  (#650)
• Allow specifying emitter bounds with lower_bounds and upper_bounds
  (#649, #657)
• Backwards-incompatible: Deprecate dict dtype in archives and instead use
  solution_dtype, objective_dtype, and measures_dtype (#639,
  #643, #661)
• Raise KeyError in ArchiveDataFrame.get_field when field not found
  (#626)
• Support array backends in ArrayStore via Python array API Standard
  (#570, #645)
• Backwards-incompatible: Remove raw_dict methods from ArrayStore
  (#575)

Improvements

• Use dtypes when calling asarray in archive methods (#673)
• Replace cKDTree usage with KDTree (#669)
• Support ProximityArchive in parallel_axes_plot (#647)
• Cast dtype when validating arguments (#646)
• Add type annotations and use ty for type checking (#624)
• Migrate from pylint to ruff for linting (#605, #607, #612,
  #619, #666)
• Replace isort with ruff import check (#603)

Documentation

• Add tutorial on centroid specification for CVTArchive (#662, #680)
• Update DQD and QDHF tutorials (#659)