How to install the plugin? #1
Description
Could you write down a short step-by-step guide to install the plugin?
I tried Fiji -> Plugins -> Install Plugins using the TimelapseReg_.java in the src folder.
I get TimelapseReg as an option in the menu when restarting. Clicking it results in an error as follows:
Compiling 1 file in /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java1134285311211750044 No javac.jar found (looked in /Applications/Fiji.app/jars)! Unable to locate an executable at "/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home//bin/javac" (-1) java.lang.RuntimeException: Could not even fall back to javac in the PATH at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:129) at org.scijava.minimaven.MavenProject.build(MavenProject.java:538) at org.scijava.minimaven.MavenProject.build(MavenProject.java:463) at org.scijava.minimaven.MavenProject.build(MavenProject.java:446) at org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:211) at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:135) at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:173) at org.scijava.script.ScriptModule.run(ScriptModule.java:173) at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167) at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126) at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65) at org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:191) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.RuntimeException: exit status 2: [javac, -classpath, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java1134285311211750044/target/classes:/Applications/Fiji.app/plugins/3D_Blob_Segmentation-2.0.2.jar:/Applications/Fiji.app/plugins/3D_Objects_Counter-2.0.0.jar:/Applications/Fiji.app/plugins/3D_Viewer-3.1.0.jar:/Applications/Fiji.app/plugins/Algorithm_Launcher.jar:/Applications/Fiji.app/plugins/AnalyzeSkeleton_-3.0.0.jar:/Applications/Fiji.app/plugins/Anisotropic_Diffusion_2D-2.0.0.jar:/System/Library/Java/Extensions/AppleScriptEngine.jar:/Applications/Fiji.app/plugins/Archipelago_Plugins-0.5.2.jar:/Applications/Fiji.app/plugins/Arrow_-2.0.1.jar:/Applications/Fiji.app/plugins/Auto_Threshold-1.16.1.jar:/Applications/Fiji.app/plugins/BalloonSegmentation_-2.0.0.jar:/Applications/Fiji.app/plugins/BeanShell_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Bug_Submitter-2.1.0.jar:/Applications/Fiji.app/plugins/CLI_-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/CPU_Meter-2.0.0.jar:/Applications/Fiji.app/plugins/Calculator_Plus-2.0.0.jar:/Applications/Fiji.app/plugins/Cell_Counter-2.2.0.jar:/Applications/Fiji.app/plugins/Clojure_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Colocalisation_Analysis-2.2.0.jar:/Applications/Fiji.app/plugins/Color_Histogram-2.0.6.jar:/Applications/Fiji.app/plugins/Color_Inspector_3D-2.3.1.jar:/Applications/Fiji.app/plugins/Colour_Deconvolution-3.0.0.jar:/Applications/Fiji.app/plugins/CorrectBleach_-2.0.1.jar:/Applications/Fiji.app/plugins/Descriptor_based_registration-2.0.11.jar:/Applications/Fiji.app/plugins/Dichromacy_-2.1.0.jar:/Applications/Fiji.app/plugins/Differentials_-2.0.0.jar:/Applications/Fiji.app/plugins/Directionality_-2.0.1.jar:/Applications/Fiji.app/plugins/Extended_Depth_Field-2.0.1.jar:/Applications/Fiji.app/plugins/FS_Align_TrakEM2-2.0.1.jar:/Applications/Fiji.app/plugins/Feature_Detection-2.0.1.jar:/Applications/Fiji.app/plugins/Fiji_Archipelago-2.0.0.jar:/Applications/Fiji.app/plugins/Fiji_Developer-2.0.3.jar:/Applications/Fiji.app/plugins/Fiji_Package_Maker-2.1.0.jar:/Applications/Fiji.app/plugins/Fiji_Plugins-3.0.0.jar:/Applications/Fiji.app/plugins/Fiji_Updater.jar:/Applications/Fiji.app/plugins/FlowJ_-1.29.1.jar:/Applications/Fiji.app/plugins/Graph_Cut-1.0.1.jar:/Applications/Fiji.app/plugins/Gray_Morphology-2.3.3.jar:/Applications/Fiji.app/plugins/H5J_Loader_Plugin-1.0.4.jar:/Applications/Fiji.app/plugins/Helmholtz_Analysis-2.0.1.jar:/Applications/Fiji.app/plugins/IJ_Robot-2.0.0.jar:/Applications/Fiji.app/plugins/IO_-2.3.0.jar:/Applications/Fiji.app/plugins/Image_5D-1.2.6.jar:/Applications/Fiji.app/plugins/Image_Expression_Parser-3.0.0.jar:/Applications/Fiji.app/plugins/Interactive_3D_Surface_Plot-2.4.1.jar:/Applications/Fiji.app/plugins/IsoData_Classifier-2.0.0.jar:/Applications/Fiji.app/plugins/JLargeArrays-1.2.jar:/Applications/Fiji.app/plugins/JRuby_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/JTransforms-3.0.jar:/Applications/Fiji.app/jars/JWlz-1.4.0.jar:/Applications/Fiji.app/plugins/Javascript_-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Jython_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Kuwahara_Filter-2.0.0.jar:/Applications/Fiji.app/plugins/LSM_Reader-4.1.1.jar:/Applications/Fiji.app/plugins/LSM_Toolbox-4.1.1.jar:/Applications/Fiji.app/plugins/Lasso_and_Blow_Tool-2.0.1.jar:/Applications/Fiji.app/plugins/Linear_Kuwahara-2.0.0.jar:/Applications/Fiji.app/plugins/LocalThickness_-4.0.0.jar:/System/Library/Java/Extensions/MRJToolkit.jar:/Applications/Fiji.app/plugins/MTrack2_-2.0.0.jar:/Applications/Fiji.app/plugins/M_I_P-2.0.0.jar:/Applications/Fiji.app/plugins/Manual_Drift_Correction-1.0.0.jar:/Applications/Fiji.app/plugins/Manual_Tracking-2.1.0.jar:/Applications/Fiji.app/plugins/MosaicJ_-2.0.0.jar:/Applications/Fiji.app/plugins/Multi_Kymograph-2.0.0.jar:/Applications/Fiji.app/plugins/PIV_analyser-1.1.1.jar:/Applications/Fiji.app/plugins/PointPicker_-2.0.0.jar:/Applications/Fiji.app/plugins/QuickPALM_-1.1.1.jar:/Applications/Fiji.app/plugins/RATS_-2.0.0.jar:/Applications/Fiji.app/plugins/Reconstruct_Reader-2.0.2.jar:/Applications/Fiji.app/plugins/Refresh_Javas-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/SPIM_Opener-2.0.1.jar:/Applications/Fiji.app/plugins/SPIM_Registration-3.0.5.jar:/Applications/Fiji.app/plugins/Samples_-2.0.1.jar:/Applications/Fiji.app/plugins/Series_Labeler-2.0.0.jar:/Applications/Fiji.app/plugins/SheppLogan_-2.0.0.jar:/Applications/Fiji.app/plugins/Sholl_Analysis-3.4.5.jar:/Applications/Fiji.app/plugins/Simple_Neurite_Tracer-2.0.4.jar:/Applications/Fiji.app/plugins/Siox_Segmentation-1.0.4.jar:/Applications/Fiji.app/plugins/Skeletonize3D_-1.0.2.jar:/Applications/Fiji.app/plugins/Snakuscule_-2.0.0.jar:/Applications/Fiji.app/plugins/SplineDeformationGenerator_-2.0.0.jar:/Applications/Fiji.app/plugins/StackReg_-2.0.0.jar:/Applications/Fiji.app/plugins/Stack_Manipulation-2.0.1.jar:/Applications/Fiji.app/plugins/Statistical_Region_Merging-2.0.0.jar:/Applications/Fiji.app/plugins/Stitching_-3.1.0.jar:/Applications/Fiji.app/plugins/Sync_Win-1.7-fiji3.jar:/Applications/Fiji.app/jars/T2-NIT-1.1.0.jar:/Applications/Fiji.app/jars/T2-TreelineGraph-1.1.0.jar:/Applications/Fiji.app/plugins/Thread_Killer-2.0.0.jar:/Applications/Fiji.app/plugins/Time_Lapse-2.0.1.jar:/Applications/Fiji.app/plugins/Time_Stamper-2.0.0.jar:/Applications/Fiji.app/plugins/ToAST_-25.0.1.jar:/Applications/Fiji.app/plugins/TopoJ_-2.0.0.jar:/Applications/Fiji.app/plugins/TrackMate_-2.8.1.jar:/Applications/Fiji.app/plugins/Trainable_Segmentation-2.3.0.jar:/Applications/Fiji.app/plugins/TrakEM2_-1.0g.jar:/Applications/Fiji.app/plugins/TrakEM2_Archipelago-2.0.0.jar:/Applications/Fiji.app/plugins/TurboReg_-2.0.0.jar:/Applications/Fiji.app/plugins/UnwarpJ_-2.0.0.jar:/Applications/Fiji.app/jars/VIB-lib-2.1.1.jar:/Applications/Fiji.app/plugins/VIB_-2.0.3.jar:/Applications/Fiji.app/plugins/Vaa3d_Reader-2.0.1.jar:/Applications/Fiji.app/plugins/Vaa3d_Writer-1.0.1.jar:/Applications/Fiji.app/jars/VectorString-1.0.2.jar:/Applications/Fiji.app/plugins/Video_Editing-2.0.0.jar:/Applications/Fiji.app/plugins/View5D_-1.3.1.jar:/Applications/Fiji.app/plugins/Volume_Calculator-1.0.2.jar:/Applications/Fiji.app/plugins/Volume_Viewer-2.01.1.jar:/Applications/Fiji.app/jars/ant.jar:/Applications/Fiji.app/jars/ant-junit.jar:/Applications/Fiji.app/jars/ant-launcher.jar:/Applications/Fiji.app/jars/ant-nodeps.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/apple_provider.jar:/Applications/Fiji.app/jars/args4j-2.0.25.jar:/Applications/Fiji.app/jars/asm-4.0.jar:/Applications/Fiji.app/jars/asm-analysis-4.0.jar:/Applications/Fiji.app/jars/asm-commons-4.0.jar:/Applications/Fiji.app/jars/asm-tree-4.0.jar:/Applications/Fiji.app/jars/asm-util-4.0.jar:/Applications/Fiji.app/jars/autocomplete-2.5.7.jar:/Applications/Fiji.app/plugins/bUnwarpJ_-2.6.3.jar:/Applications/Fiji.app/jars/base64-2.3.8.jar:/Applications/Fiji.app/jars/batik-1.8.jar:/Applications/Fiji.app/jars/bcmail-jdk14-138.jar:/Applications/Fiji.app/jars/bcprov-jdk14-138.jar:/Applications/Fiji.app/jars/bigdataviewer-core-2.1.0.jar:/Applications/Fiji.app/plugins/bigdataviewer_fiji-2.0.0.jar:/Applications/Fiji.app/plugins/bigwarp_fiji-2.1.0.jar:/Applications/Fiji.app/plugins/bio-formats_plugins-5.1.10.jar:/Applications/Fiji.app/plugins/blockmatching_-2.1.1.jar:/Applications/Fiji.app/jars/bsh-2.0b4.jar:/Applications/Fiji.app/jars/bytelist-1.0.11.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/cldrdata.jar:/Applications/Fiji.app/jars/clojure-1.6.0.jar:/Applications/Fiji.app/jars/commons-codec-1.8.jar:/Applications/Fiji.app/jars/commons-lang3-3.1.jar:/Applications/Fiji.app/jars/commons-logging-1.1.1.jar:/Applications/Fiji.app/jars/commons-math3-3.4.1.jar:/System/Library/Java/Extensions/dns_sd.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/dnsns.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/dnsns.jar:/Applications/Fiji.app/jars/ejml-0.24.jar:/Applications/Fiji.app/jars/eventbus-1.4.jar:/Applications/Fiji.app/jars/fake-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/ffmpeg-2.6.1-0.11.jar:/Applications/Fiji.app/jars/macosx/ffmpeg-2.6.1-0.11-macosx-x86_64.jar:/Applications/Fiji.app/jars/fiji-compat-2.0.2.jar:/Applications/Fiji.app/jars/fiji-lib-2.1.1.jar:/Applications/Fiji.app/jars/fiji-scripting-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/bio-formats/formats-api-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-bsd-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-common-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-gpl-5.1.10.jar:/Applications/Fiji.app/jars/gentyref-1.1.0.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/gluegen-rt.jar:/Applications/Fiji.app/jars/groovy-2.3.6.jar:/Applications/Fiji.app/jars/gson-2.2.4.jar:/Applications/Fiji.app/jars/guava-18.0.jar:/Applications/Fiji.app/jars/ij-1.51j.jar:/Applications/Fiji.app/plugins/ij-ImageIO_.jar:/Applications/Fiji.app/jars/ij1-patcher-0.12.3.jar:/Applications/Fiji.app/jars/imagej-2.0.0-rc-43.jar:/Applications/Fiji.app/jars/imagej-common-0.19.0.jar:/Applications/Fiji.app/jars/imagej-deprecated-0.1.1.jar:/Applications/Fiji.app/jars/imagej-launcher-4.0.5.jar:/Applications/Fiji.app/jars/imagej-legacy-0.17.5.jar:/Applications/Fiji.app/jars/imagej-ops-0.23.0.jar:/Applications/Fiji.app/jars/imagej-plugins-commands-0.6.0.jar:/Applications/Fiji.app/jars/imagej-plugins-tools-0.3.0.jar:/Applications/Fiji.app/jars/imagej-plugins-uploader-ssh-0.3.0.jar:/Applications/Fiji.app/jars/imagej-plugins-uploader-webdav-0.2.0.jar:/Applications/Fiji.app/jars/imagej-scripting-0.2.3.jar:/Applications/Fiji.app/jars/imagej-ui-awt-0.3.0.jar:/Applications/Fiji.app/jars/imagej-ui-swing-0.16.0.jar:/Applications/Fiji.app/jars/imagej-updater-0.7.9.jar:/Applications/Fiji.app/jars/imageware-2.0.0.jar:/Applications/Fiji.app/jars/imglib2-2.5.0.jar:/Applications/Fiji.app/jars/imglib2-algorithm-0.3.3.jar:/Applications/Fiji.app/jars/imglib2-algorithm-fft-0.1.2.jar:/Applications/Fiji.app/jars/imglib2-algorithm-gpl-0.1.5.jar:/Applications/Fiji.app/jars/imglib2-ij-2.0.0-beta-31.jar:/Applications/Fiji.app/jars/imglib2-realtransform-2.0.0-beta-29.jar:/Applications/Fiji.app/jars/imglib2-roi-0.4.2.jar:/Applications/Fiji.app/jars/imglib2-ui-2.0.0-beta-29.jar:/Applications/Fiji.app/jars/invokebinder-1.2.jar:/Applications/Fiji.app/jars/itext-2.1.5.jar:/Applications/Fiji.app/jars/itextpdf-5.1.1.jar:/System/Library/Java/Extensions/j3daudio.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/j3dcore.jar:/System/Library/Java/Extensions/j3dcore.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/j3dutils.jar:/System/Library/Java/Extensions/j3dutils.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/jaccess.jar:/Applications/Fiji.app/jars/jacl.jar:/Applications/Fiji.app/jars/jai-codec-1.1.3.jar:/Applications/Fiji.app/jars/jai-core-1.1.3.jar:/Applications/Fiji.app/plugins/jai_codec.jar:/System/Library/Java/Extensions/jai_codec.jar:/Applications/Fiji.app/plugins/jai_core.jar:/System/Library/Java/Extensions/jai_core.jar:/Applications/Fiji.app/jars/bio-formats/jai_imageio-5.1.10.jar:/Applications/Fiji.app/jars/jama-1.0.3.jar:/Applications/Fiji.app/jars/java-cup-0.11a.jar:/Applications/Fiji.app/jars/javacpp-0.11.jar:/Applications/Fiji.app/jars/javassist-3.19.0-GA.jar:/Applications/Fiji.app/jars/jcodings-1.0.10.jar:/Applications/Fiji.app/jars/jcommon-1.0.23.jar:/Applications/Fiji.app/jars/jdatepicker-1.3.2.jar:/Applications/Fiji.app/jars/jdom2-2.0.6.jar:/Applications/Fiji.app/jars/jep-2.4.2.jar:/Applications/Fiji.app/jars/jffi-1.2.7-native.jar:/Applications/Fiji.app/jars/jffi-1.2.7.jar:/Applications/Fiji.app/jars/jfreechart-1.0.19.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/jfxrt.jar:/Applications/Fiji.app/jars/jgoodies-common-1.7.0.jar:/Applications/Fiji.app/jars/jgoodies-forms-1.7.2.jar:/Applications/Fiji.app/jars/jgrapht-0.8.3.jar:/Applications/Fiji.app/jars/jgraphx-1.10.4.1.jar:/Applications/Fiji.app/jars/jhdf5-14.12.0.jar:/Applications/Fiji.app/jars/jhotdraw-7.6.0.jar:/Applications/Fiji.app/jars/jitk-tps-1.3.1.jar:/Applications/Fiji.app/jars/jna-3.2.7.jar:/Applications/Fiji.app/jars/jnr-constants-0.8.5.jar:/Applications/Fiji.app/jars/jnr-enxio-0.4.jar:/Applications/Fiji.app/jars/jnr-ffi-1.0.7.jar:/Applications/Fiji.app/jars/jnr-netdb-1.1.2.jar:/Applications/Fiji.app/jars/jnr-posix-3.0.1.jar:/Applications/Fiji.app/jars/jnr-unixsocket-0.3.jar:/Applications/Fiji.app/jars/jnr-x86asm-1.0.2.jar:/Applications/Fiji.app/jars/joda-time-2.3.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/jogl.jar:/Applications/Fiji.app/jars/joni-2.1.1.jar:/Applications/Fiji.app/jars/jpedalSTD-2.80b11.jar:/Applications/Fiji.app/jars/jruby-core-1.7.12.jar:/Applications/Fiji.app/jars/jruby-stdlib-1.7.12.jar:/Applications/Fiji.app/jars/js.jar:/Applications/Fiji.app/jars/jsch-0.1.49.jar:/Applications/Fiji.app/jars/jython-shaded-2.5.3.jar:/Applications/Fiji.app/jars/jzlib-1.1.2.jar:/Applications/Fiji.app/jars/kryo-2.24.0.jar:/Applications/Fiji.app/jars/languagesupport-2.5.8.jar:/Applications/Fiji.app/jars/legacy-imglib1-1.1.4-DEPRECATED.jar:/Applications/Fiji.app/plugins/level_sets-1.0.1.jar:/System/Library/Java/Extensions/libAppleScriptEngine.jnilib:/System/Library/Java/Extensions/libJ3D.jnilib:/System/Library/Java/Extensions/libJ3DAudio.jnilib:/System/Library/Java/Extensions/libJ3DUtils.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libgluegen-rt.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl_awt.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl_cg.jnilib:/System/Library/Java/Extensions/libmlib_jai.jnilib:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/localedata.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/localedata.jar:/Applications/Fiji.app/jars/log4j-1.2.17.jar:/Applications/Fiji.app/jars/logback-classic-1.1.1.jar:/Applications/Fiji.app/jars/logback-core-1.1.1.jar:/Applications/Fiji.app/jars/mapdb-1.0.3.jar:/Applications/Fiji.app/jars/markdownj-0.3.0-1.0.2b4.jar:/Applications/Fiji.app/jars/bio-formats/mdbtools-java-5.1.10.jar:/Applications/Fiji.app/jars/metadata-extractor-2.6.2.jar:/Applications/Fiji.app/jars/bio-formats/metakit-5.1.10.jar:/Applications/Fiji.app/jars/miglayout-3.7.4-swing.jar:/Applications/Fiji.app/jars/mij-1.3.6-fiji2.jar:/Applications/Fiji.app/jars/mines-jtk-20100113.jar:/Applications/Fiji.app/jars/minimaven-2.2.0.jar:/Applications/Fiji.app/jars/minlog-1.2.jar:/System/Library/Java/Extensions/mlibwrapper_jai.jar:/Applications/Fiji.app/plugins/moco_.jar:/Applications/Fiji.app/jars/mpicbg-1.1.1.jar:/Applications/Fiji.app/jars/mpicbg-trakem2-1.2.2.jar:/Applications/Fiji.app/plugins/mpicbg_-1.1.1.jar:/Applications/Fiji.app/jars/nailgun-server-0.9.1.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/nashorn.jar:/Applications/Fiji.app/jars/native-lib-loader-2.1.3.jar:/Applications/Fiji.app/jars/netcdf-4.3.19.jar:/Applications/Fiji.app/jars/object-inspector-0.1.jar:/Applications/Fiji.app/jars/objenesis-2.1.jar:/Applications/Fiji.app/jars/bio-formats/ome-poi-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/ome-xml-5.1.10.jar:/Applications/Fiji.app/jars/opencsv-2.4.jar:/Applications/Fiji.app/jars/options-1.1.jar:/Applications/Fiji.app/jars/pal-optimization-2.0.0.jar:/Applications/Fiji.app/plugins/panorama_-3.0.1.jar:/Applications/Fiji.app/jars/pentaho-package-manager-1.0.8.jar:/Applications/Fiji.app/jars/perf4j-0.9.13.jar:/Applications/Fiji.app/plugins:/Applications/Fiji.app/jars/postgresql-8.2-507.jdbc3.jar:/Applications/Fiji.app/plugins/register_virtual_stack_slices-3.0.0.jar:/Applications/Fiji.app/plugins/registration_3d-2.0.0.jar:/Applications/Fiji.app/jars/rhino-1.7.6.jar:/Applications/Fiji.app/jars/rsyntaxtextarea-2.5.8.jar:/Applications/Fiji.app/jars/scifio-0.27.1.jar:/Applications/Fiji.app/jars/scifio-bf-compat-2.0.0.jar:/Applications/Fiji.app/jars/scifio-cli-0.3.2.jar:/Applications/Fiji.app/jars/scifio-hdf5-0.1.1.jar:/Applications/Fiji.app/jars/scifio-jai-imageio-1.1.0.jar:/Applications/Fiji.app/jars/scifio-lifesci-0.7.0.jar:/Applications/Fiji.app/jars/scifio-ome-xml-0.13.0.jar:/Applications/Fiji.app/jars/scifio-tools-0.14.0.jar:/Applications/Fiji.app/jars/scijava-common-2.50.1.jar:/Applications/Fiji.app/jars/scijava-config-2.0.1.jar:/Applications/Fiji.app/jars/scijava-expression-parser-2.1.1.jar:/Applications/Fiji.app/jars/scijava-plugins-commands-0.2.1.jar:/Applications/Fiji.app/jars/scijava-plugins-platforms-0.2.0.jar:/Applications/Fiji.app/jars/scijava-plugins-text-markdown-0.1.2.jar:/Applications/Fiji.app/jars/scijava-plugins-text-plain-0.1.2.jar:/Applications/Fiji.app/jars/scijava-ui-awt-0.1.4.jar:/Applications/Fiji.app/jars/scijava-ui-swing-0.7.1.jar:/Applications/Fiji.app/jars/scripting-beanshell-0.2.3.jar:/Applications/Fiji.app/jars/scripting-clojure-0.1.4.jar:/Applications/Fiji.app/jars/scripting-groovy-0.2.3.jar:/Applications/Fiji.app/jars/scripting-java-0.3.5.jar:/Applications/Fiji.app/jars/scripting-javascript-0.4.2.jar:/Applications/Fiji.app/jars/scripting-jruby-0.2.3.jar:/Applications/Fiji.app/jars/scripting-jython-0.2.4.jar:/Applications/Fiji.app/jars/slf4j-api-1.7.6.jar:/Applications/Fiji.app/jars/snakeyaml-1.13.jar:/Applications/Fiji.app/jars/bio-formats/specification-5.1.10.jar:/Applications/Fiji.app/jars/spim_data-2.0.1.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunec.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunjce_provider.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/sunjce_provider.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunpkcs11.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/sunpkcs11.jar:/Applications/Fiji.app/jars/swing-checkbox-tree-1.0.1.jar:/Applications/Fiji.app/plugins/trakem2_tps-1.1.1.jar:/Applications/Fiji.app/jars/trove4j-3.0.3.jar:/Applications/Fiji.app/jars/bio-formats/turbojpeg-5.1.10.jar:/Applications/Fiji.app/jars/udunits-4.3.18.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/vecmath.jar:/System/Library/Java/Extensions/vecmath.jar:/Applications/Fiji.app/jars/wavelets-2.0.0.jar:/Applications/Fiji.app/jars/weave_jy2java-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/weka-dev-3.7.11.jar:/Applications/Fiji.app/jars/xercesImpl-2.8.1.jar:/Applications/Fiji.app/jars/xml-apis-1.3.03.jar:/Applications/Fiji.app/jars/xmpcore-5.1.2.jar:/Applications/Fiji.app/jars/yecht-1.0.jar:/Applications/Fiji.app/plugins/z_spacing-0.0.1-SNAPSHOT.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/zipfs.jar, -d, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java1134285311211750044/target/classes, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java1134285311211750044/src/main/java/TimelapseReg_.java] org.scijava.console.MultiPrintStream@1d435cd at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:131) at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:71) at org.scijava.minimaven.JavaCompiler.execute(JavaCompiler.java:169) at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:126) ... 15 more Compiling 1 file in /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java2342513084753706305 No javac.jar found (looked in /Applications/Fiji.app/jars)! Unable to locate an executable at "/Library/Internet Plug-Ins/JavaAppletPlugin.plugin/Contents/Home//bin/javac" (-1) java.lang.RuntimeException: Could not even fall back to javac in the PATH at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:129) at org.scijava.minimaven.MavenProject.build(MavenProject.java:538) at org.scijava.minimaven.MavenProject.build(MavenProject.java:463) at org.scijava.minimaven.MavenProject.build(MavenProject.java:446) at org.scijava.plugins.scripting.java.JavaEngine.compile(JavaEngine.java:211) at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:135) at org.scijava.plugins.scripting.java.JavaEngine.eval(JavaEngine.java:173) at org.scijava.script.ScriptModule.run(ScriptModule.java:173) at org.scijava.module.ModuleRunner.run(ModuleRunner.java:167) at org.scijava.module.ModuleRunner.call(ModuleRunner.java:126) at org.scijava.module.ModuleRunner.call(ModuleRunner.java:65) at org.scijava.thread.DefaultThreadService$2.call(DefaultThreadService.java:191) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.RuntimeException: exit status 2: [javac, -classpath, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java2342513084753706305/target/classes:/Applications/Fiji.app/plugins/3D_Blob_Segmentation-2.0.2.jar:/Applications/Fiji.app/plugins/3D_Objects_Counter-2.0.0.jar:/Applications/Fiji.app/plugins/3D_Viewer-3.1.0.jar:/Applications/Fiji.app/plugins/Algorithm_Launcher.jar:/Applications/Fiji.app/plugins/AnalyzeSkeleton_-3.0.0.jar:/Applications/Fiji.app/plugins/Anisotropic_Diffusion_2D-2.0.0.jar:/System/Library/Java/Extensions/AppleScriptEngine.jar:/Applications/Fiji.app/plugins/Archipelago_Plugins-0.5.2.jar:/Applications/Fiji.app/plugins/Arrow_-2.0.1.jar:/Applications/Fiji.app/plugins/Auto_Threshold-1.16.1.jar:/Applications/Fiji.app/plugins/BalloonSegmentation_-2.0.0.jar:/Applications/Fiji.app/plugins/BeanShell_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Bug_Submitter-2.1.0.jar:/Applications/Fiji.app/plugins/CLI_-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/CPU_Meter-2.0.0.jar:/Applications/Fiji.app/plugins/Calculator_Plus-2.0.0.jar:/Applications/Fiji.app/plugins/Cell_Counter-2.2.0.jar:/Applications/Fiji.app/plugins/Clojure_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Colocalisation_Analysis-2.2.0.jar:/Applications/Fiji.app/plugins/Color_Histogram-2.0.6.jar:/Applications/Fiji.app/plugins/Color_Inspector_3D-2.3.1.jar:/Applications/Fiji.app/plugins/Colour_Deconvolution-3.0.0.jar:/Applications/Fiji.app/plugins/CorrectBleach_-2.0.1.jar:/Applications/Fiji.app/plugins/Descriptor_based_registration-2.0.11.jar:/Applications/Fiji.app/plugins/Dichromacy_-2.1.0.jar:/Applications/Fiji.app/plugins/Differentials_-2.0.0.jar:/Applications/Fiji.app/plugins/Directionality_-2.0.1.jar:/Applications/Fiji.app/plugins/Extended_Depth_Field-2.0.1.jar:/Applications/Fiji.app/plugins/FS_Align_TrakEM2-2.0.1.jar:/Applications/Fiji.app/plugins/Feature_Detection-2.0.1.jar:/Applications/Fiji.app/plugins/Fiji_Archipelago-2.0.0.jar:/Applications/Fiji.app/plugins/Fiji_Developer-2.0.3.jar:/Applications/Fiji.app/plugins/Fiji_Package_Maker-2.1.0.jar:/Applications/Fiji.app/plugins/Fiji_Plugins-3.0.0.jar:/Applications/Fiji.app/plugins/Fiji_Updater.jar:/Applications/Fiji.app/plugins/FlowJ_-1.29.1.jar:/Applications/Fiji.app/plugins/Graph_Cut-1.0.1.jar:/Applications/Fiji.app/plugins/Gray_Morphology-2.3.3.jar:/Applications/Fiji.app/plugins/H5J_Loader_Plugin-1.0.4.jar:/Applications/Fiji.app/plugins/Helmholtz_Analysis-2.0.1.jar:/Applications/Fiji.app/plugins/IJ_Robot-2.0.0.jar:/Applications/Fiji.app/plugins/IO_-2.3.0.jar:/Applications/Fiji.app/plugins/Image_5D-1.2.6.jar:/Applications/Fiji.app/plugins/Image_Expression_Parser-3.0.0.jar:/Applications/Fiji.app/plugins/Interactive_3D_Surface_Plot-2.4.1.jar:/Applications/Fiji.app/plugins/IsoData_Classifier-2.0.0.jar:/Applications/Fiji.app/plugins/JLargeArrays-1.2.jar:/Applications/Fiji.app/plugins/JRuby_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/JTransforms-3.0.jar:/Applications/Fiji.app/jars/JWlz-1.4.0.jar:/Applications/Fiji.app/plugins/Javascript_-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Jython_Interpreter-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/Kuwahara_Filter-2.0.0.jar:/Applications/Fiji.app/plugins/LSM_Reader-4.1.1.jar:/Applications/Fiji.app/plugins/LSM_Toolbox-4.1.1.jar:/Applications/Fiji.app/plugins/Lasso_and_Blow_Tool-2.0.1.jar:/Applications/Fiji.app/plugins/Linear_Kuwahara-2.0.0.jar:/Applications/Fiji.app/plugins/LocalThickness_-4.0.0.jar:/System/Library/Java/Extensions/MRJToolkit.jar:/Applications/Fiji.app/plugins/MTrack2_-2.0.0.jar:/Applications/Fiji.app/plugins/M_I_P-2.0.0.jar:/Applications/Fiji.app/plugins/Manual_Drift_Correction-1.0.0.jar:/Applications/Fiji.app/plugins/Manual_Tracking-2.1.0.jar:/Applications/Fiji.app/plugins/MosaicJ_-2.0.0.jar:/Applications/Fiji.app/plugins/Multi_Kymograph-2.0.0.jar:/Applications/Fiji.app/plugins/PIV_analyser-1.1.1.jar:/Applications/Fiji.app/plugins/PointPicker_-2.0.0.jar:/Applications/Fiji.app/plugins/QuickPALM_-1.1.1.jar:/Applications/Fiji.app/plugins/RATS_-2.0.0.jar:/Applications/Fiji.app/plugins/Reconstruct_Reader-2.0.2.jar:/Applications/Fiji.app/plugins/Refresh_Javas-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/plugins/SPIM_Opener-2.0.1.jar:/Applications/Fiji.app/plugins/SPIM_Registration-3.0.5.jar:/Applications/Fiji.app/plugins/Samples_-2.0.1.jar:/Applications/Fiji.app/plugins/Series_Labeler-2.0.0.jar:/Applications/Fiji.app/plugins/SheppLogan_-2.0.0.jar:/Applications/Fiji.app/plugins/Sholl_Analysis-3.4.5.jar:/Applications/Fiji.app/plugins/Simple_Neurite_Tracer-2.0.4.jar:/Applications/Fiji.app/plugins/Siox_Segmentation-1.0.4.jar:/Applications/Fiji.app/plugins/Skeletonize3D_-1.0.2.jar:/Applications/Fiji.app/plugins/Snakuscule_-2.0.0.jar:/Applications/Fiji.app/plugins/SplineDeformationGenerator_-2.0.0.jar:/Applications/Fiji.app/plugins/StackReg_-2.0.0.jar:/Applications/Fiji.app/plugins/Stack_Manipulation-2.0.1.jar:/Applications/Fiji.app/plugins/Statistical_Region_Merging-2.0.0.jar:/Applications/Fiji.app/plugins/Stitching_-3.1.0.jar:/Applications/Fiji.app/plugins/Sync_Win-1.7-fiji3.jar:/Applications/Fiji.app/jars/T2-NIT-1.1.0.jar:/Applications/Fiji.app/jars/T2-TreelineGraph-1.1.0.jar:/Applications/Fiji.app/plugins/Thread_Killer-2.0.0.jar:/Applications/Fiji.app/plugins/Time_Lapse-2.0.1.jar:/Applications/Fiji.app/plugins/Time_Stamper-2.0.0.jar:/Applications/Fiji.app/plugins/ToAST_-25.0.1.jar:/Applications/Fiji.app/plugins/TopoJ_-2.0.0.jar:/Applications/Fiji.app/plugins/TrackMate_-2.8.1.jar:/Applications/Fiji.app/plugins/Trainable_Segmentation-2.3.0.jar:/Applications/Fiji.app/plugins/TrakEM2_-1.0g.jar:/Applications/Fiji.app/plugins/TrakEM2_Archipelago-2.0.0.jar:/Applications/Fiji.app/plugins/TurboReg_-2.0.0.jar:/Applications/Fiji.app/plugins/UnwarpJ_-2.0.0.jar:/Applications/Fiji.app/jars/VIB-lib-2.1.1.jar:/Applications/Fiji.app/plugins/VIB_-2.0.3.jar:/Applications/Fiji.app/plugins/Vaa3d_Reader-2.0.1.jar:/Applications/Fiji.app/plugins/Vaa3d_Writer-1.0.1.jar:/Applications/Fiji.app/jars/VectorString-1.0.2.jar:/Applications/Fiji.app/plugins/Video_Editing-2.0.0.jar:/Applications/Fiji.app/plugins/View5D_-1.3.1.jar:/Applications/Fiji.app/plugins/Volume_Calculator-1.0.2.jar:/Applications/Fiji.app/plugins/Volume_Viewer-2.01.1.jar:/Applications/Fiji.app/jars/ant.jar:/Applications/Fiji.app/jars/ant-junit.jar:/Applications/Fiji.app/jars/ant-launcher.jar:/Applications/Fiji.app/jars/ant-nodeps.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/apple_provider.jar:/Applications/Fiji.app/jars/args4j-2.0.25.jar:/Applications/Fiji.app/jars/asm-4.0.jar:/Applications/Fiji.app/jars/asm-analysis-4.0.jar:/Applications/Fiji.app/jars/asm-commons-4.0.jar:/Applications/Fiji.app/jars/asm-tree-4.0.jar:/Applications/Fiji.app/jars/asm-util-4.0.jar:/Applications/Fiji.app/jars/autocomplete-2.5.7.jar:/Applications/Fiji.app/plugins/bUnwarpJ_-2.6.3.jar:/Applications/Fiji.app/jars/base64-2.3.8.jar:/Applications/Fiji.app/jars/batik-1.8.jar:/Applications/Fiji.app/jars/bcmail-jdk14-138.jar:/Applications/Fiji.app/jars/bcprov-jdk14-138.jar:/Applications/Fiji.app/jars/bigdataviewer-core-2.1.0.jar:/Applications/Fiji.app/plugins/bigdataviewer_fiji-2.0.0.jar:/Applications/Fiji.app/plugins/bigwarp_fiji-2.1.0.jar:/Applications/Fiji.app/plugins/bio-formats_plugins-5.1.10.jar:/Applications/Fiji.app/plugins/blockmatching_-2.1.1.jar:/Applications/Fiji.app/jars/bsh-2.0b4.jar:/Applications/Fiji.app/jars/bytelist-1.0.11.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/cldrdata.jar:/Applications/Fiji.app/jars/clojure-1.6.0.jar:/Applications/Fiji.app/jars/commons-codec-1.8.jar:/Applications/Fiji.app/jars/commons-lang3-3.1.jar:/Applications/Fiji.app/jars/commons-logging-1.1.1.jar:/Applications/Fiji.app/jars/commons-math3-3.4.1.jar:/System/Library/Java/Extensions/dns_sd.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/dnsns.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/dnsns.jar:/Applications/Fiji.app/jars/ejml-0.24.jar:/Applications/Fiji.app/jars/eventbus-1.4.jar:/Applications/Fiji.app/jars/fake-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/ffmpeg-2.6.1-0.11.jar:/Applications/Fiji.app/jars/macosx/ffmpeg-2.6.1-0.11-macosx-x86_64.jar:/Applications/Fiji.app/jars/fiji-compat-2.0.2.jar:/Applications/Fiji.app/jars/fiji-lib-2.1.1.jar:/Applications/Fiji.app/jars/fiji-scripting-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/bio-formats/formats-api-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-bsd-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-common-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/formats-gpl-5.1.10.jar:/Applications/Fiji.app/jars/gentyref-1.1.0.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/gluegen-rt.jar:/Applications/Fiji.app/jars/groovy-2.3.6.jar:/Applications/Fiji.app/jars/gson-2.2.4.jar:/Applications/Fiji.app/jars/guava-18.0.jar:/Applications/Fiji.app/jars/ij-1.51j.jar:/Applications/Fiji.app/plugins/ij-ImageIO_.jar:/Applications/Fiji.app/jars/ij1-patcher-0.12.3.jar:/Applications/Fiji.app/jars/imagej-2.0.0-rc-43.jar:/Applications/Fiji.app/jars/imagej-common-0.19.0.jar:/Applications/Fiji.app/jars/imagej-deprecated-0.1.1.jar:/Applications/Fiji.app/jars/imagej-launcher-4.0.5.jar:/Applications/Fiji.app/jars/imagej-legacy-0.17.5.jar:/Applications/Fiji.app/jars/imagej-ops-0.23.0.jar:/Applications/Fiji.app/jars/imagej-plugins-commands-0.6.0.jar:/Applications/Fiji.app/jars/imagej-plugins-tools-0.3.0.jar:/Applications/Fiji.app/jars/imagej-plugins-uploader-ssh-0.3.0.jar:/Applications/Fiji.app/jars/imagej-plugins-uploader-webdav-0.2.0.jar:/Applications/Fiji.app/jars/imagej-scripting-0.2.3.jar:/Applications/Fiji.app/jars/imagej-ui-awt-0.3.0.jar:/Applications/Fiji.app/jars/imagej-ui-swing-0.16.0.jar:/Applications/Fiji.app/jars/imagej-updater-0.7.9.jar:/Applications/Fiji.app/jars/imageware-2.0.0.jar:/Applications/Fiji.app/jars/imglib2-2.5.0.jar:/Applications/Fiji.app/jars/imglib2-algorithm-0.3.3.jar:/Applications/Fiji.app/jars/imglib2-algorithm-fft-0.1.2.jar:/Applications/Fiji.app/jars/imglib2-algorithm-gpl-0.1.5.jar:/Applications/Fiji.app/jars/imglib2-ij-2.0.0-beta-31.jar:/Applications/Fiji.app/jars/imglib2-realtransform-2.0.0-beta-29.jar:/Applications/Fiji.app/jars/imglib2-roi-0.4.2.jar:/Applications/Fiji.app/jars/imglib2-ui-2.0.0-beta-29.jar:/Applications/Fiji.app/jars/invokebinder-1.2.jar:/Applications/Fiji.app/jars/itext-2.1.5.jar:/Applications/Fiji.app/jars/itextpdf-5.1.1.jar:/System/Library/Java/Extensions/j3daudio.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/j3dcore.jar:/System/Library/Java/Extensions/j3dcore.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/j3dutils.jar:/System/Library/Java/Extensions/j3dutils.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/jaccess.jar:/Applications/Fiji.app/jars/jacl.jar:/Applications/Fiji.app/jars/jai-codec-1.1.3.jar:/Applications/Fiji.app/jars/jai-core-1.1.3.jar:/Applications/Fiji.app/plugins/jai_codec.jar:/System/Library/Java/Extensions/jai_codec.jar:/Applications/Fiji.app/plugins/jai_core.jar:/System/Library/Java/Extensions/jai_core.jar:/Applications/Fiji.app/jars/bio-formats/jai_imageio-5.1.10.jar:/Applications/Fiji.app/jars/jama-1.0.3.jar:/Applications/Fiji.app/jars/java-cup-0.11a.jar:/Applications/Fiji.app/jars/javacpp-0.11.jar:/Applications/Fiji.app/jars/javassist-3.19.0-GA.jar:/Applications/Fiji.app/jars/jcodings-1.0.10.jar:/Applications/Fiji.app/jars/jcommon-1.0.23.jar:/Applications/Fiji.app/jars/jdatepicker-1.3.2.jar:/Applications/Fiji.app/jars/jdom2-2.0.6.jar:/Applications/Fiji.app/jars/jep-2.4.2.jar:/Applications/Fiji.app/jars/jffi-1.2.7-native.jar:/Applications/Fiji.app/jars/jffi-1.2.7.jar:/Applications/Fiji.app/jars/jfreechart-1.0.19.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/jfxrt.jar:/Applications/Fiji.app/jars/jgoodies-common-1.7.0.jar:/Applications/Fiji.app/jars/jgoodies-forms-1.7.2.jar:/Applications/Fiji.app/jars/jgrapht-0.8.3.jar:/Applications/Fiji.app/jars/jgraphx-1.10.4.1.jar:/Applications/Fiji.app/jars/jhdf5-14.12.0.jar:/Applications/Fiji.app/jars/jhotdraw-7.6.0.jar:/Applications/Fiji.app/jars/jitk-tps-1.3.1.jar:/Applications/Fiji.app/jars/jna-3.2.7.jar:/Applications/Fiji.app/jars/jnr-constants-0.8.5.jar:/Applications/Fiji.app/jars/jnr-enxio-0.4.jar:/Applications/Fiji.app/jars/jnr-ffi-1.0.7.jar:/Applications/Fiji.app/jars/jnr-netdb-1.1.2.jar:/Applications/Fiji.app/jars/jnr-posix-3.0.1.jar:/Applications/Fiji.app/jars/jnr-unixsocket-0.3.jar:/Applications/Fiji.app/jars/jnr-x86asm-1.0.2.jar:/Applications/Fiji.app/jars/joda-time-2.3.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/jogl.jar:/Applications/Fiji.app/jars/joni-2.1.1.jar:/Applications/Fiji.app/jars/jpedalSTD-2.80b11.jar:/Applications/Fiji.app/jars/jruby-core-1.7.12.jar:/Applications/Fiji.app/jars/jruby-stdlib-1.7.12.jar:/Applications/Fiji.app/jars/js.jar:/Applications/Fiji.app/jars/jsch-0.1.49.jar:/Applications/Fiji.app/jars/jython-shaded-2.5.3.jar:/Applications/Fiji.app/jars/jzlib-1.1.2.jar:/Applications/Fiji.app/jars/kryo-2.24.0.jar:/Applications/Fiji.app/jars/languagesupport-2.5.8.jar:/Applications/Fiji.app/jars/legacy-imglib1-1.1.4-DEPRECATED.jar:/Applications/Fiji.app/plugins/level_sets-1.0.1.jar:/System/Library/Java/Extensions/libAppleScriptEngine.jnilib:/System/Library/Java/Extensions/libJ3D.jnilib:/System/Library/Java/Extensions/libJ3DAudio.jnilib:/System/Library/Java/Extensions/libJ3DUtils.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libgluegen-rt.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl_awt.jnilib:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/libjogl_cg.jnilib:/System/Library/Java/Extensions/libmlib_jai.jnilib:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/localedata.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/localedata.jar:/Applications/Fiji.app/jars/log4j-1.2.17.jar:/Applications/Fiji.app/jars/logback-classic-1.1.1.jar:/Applications/Fiji.app/jars/logback-core-1.1.1.jar:/Applications/Fiji.app/jars/mapdb-1.0.3.jar:/Applications/Fiji.app/jars/markdownj-0.3.0-1.0.2b4.jar:/Applications/Fiji.app/jars/bio-formats/mdbtools-java-5.1.10.jar:/Applications/Fiji.app/jars/metadata-extractor-2.6.2.jar:/Applications/Fiji.app/jars/bio-formats/metakit-5.1.10.jar:/Applications/Fiji.app/jars/miglayout-3.7.4-swing.jar:/Applications/Fiji.app/jars/mij-1.3.6-fiji2.jar:/Applications/Fiji.app/jars/mines-jtk-20100113.jar:/Applications/Fiji.app/jars/minimaven-2.2.0.jar:/Applications/Fiji.app/jars/minlog-1.2.jar:/System/Library/Java/Extensions/mlibwrapper_jai.jar:/Applications/Fiji.app/plugins/moco_.jar:/Applications/Fiji.app/jars/mpicbg-1.1.1.jar:/Applications/Fiji.app/jars/mpicbg-trakem2-1.2.2.jar:/Applications/Fiji.app/plugins/mpicbg_-1.1.1.jar:/Applications/Fiji.app/jars/nailgun-server-0.9.1.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/nashorn.jar:/Applications/Fiji.app/jars/native-lib-loader-2.1.3.jar:/Applications/Fiji.app/jars/netcdf-4.3.19.jar:/Applications/Fiji.app/jars/object-inspector-0.1.jar:/Applications/Fiji.app/jars/objenesis-2.1.jar:/Applications/Fiji.app/jars/bio-formats/ome-poi-5.1.10.jar:/Applications/Fiji.app/jars/bio-formats/ome-xml-5.1.10.jar:/Applications/Fiji.app/jars/opencsv-2.4.jar:/Applications/Fiji.app/jars/options-1.1.jar:/Applications/Fiji.app/jars/pal-optimization-2.0.0.jar:/Applications/Fiji.app/plugins/panorama_-3.0.1.jar:/Applications/Fiji.app/jars/pentaho-package-manager-1.0.8.jar:/Applications/Fiji.app/jars/perf4j-0.9.13.jar:/Applications/Fiji.app/plugins:/Applications/Fiji.app/jars/postgresql-8.2-507.jdbc3.jar:/Applications/Fiji.app/plugins/register_virtual_stack_slices-3.0.0.jar:/Applications/Fiji.app/plugins/registration_3d-2.0.0.jar:/Applications/Fiji.app/jars/rhino-1.7.6.jar:/Applications/Fiji.app/jars/rsyntaxtextarea-2.5.8.jar:/Applications/Fiji.app/jars/scifio-0.27.1.jar:/Applications/Fiji.app/jars/scifio-bf-compat-2.0.0.jar:/Applications/Fiji.app/jars/scifio-cli-0.3.2.jar:/Applications/Fiji.app/jars/scifio-hdf5-0.1.1.jar:/Applications/Fiji.app/jars/scifio-jai-imageio-1.1.0.jar:/Applications/Fiji.app/jars/scifio-lifesci-0.7.0.jar:/Applications/Fiji.app/jars/scifio-ome-xml-0.13.0.jar:/Applications/Fiji.app/jars/scifio-tools-0.14.0.jar:/Applications/Fiji.app/jars/scijava-common-2.50.1.jar:/Applications/Fiji.app/jars/scijava-config-2.0.1.jar:/Applications/Fiji.app/jars/scijava-expression-parser-2.1.1.jar:/Applications/Fiji.app/jars/scijava-plugins-commands-0.2.1.jar:/Applications/Fiji.app/jars/scijava-plugins-platforms-0.2.0.jar:/Applications/Fiji.app/jars/scijava-plugins-text-markdown-0.1.2.jar:/Applications/Fiji.app/jars/scijava-plugins-text-plain-0.1.2.jar:/Applications/Fiji.app/jars/scijava-ui-awt-0.1.4.jar:/Applications/Fiji.app/jars/scijava-ui-swing-0.7.1.jar:/Applications/Fiji.app/jars/scripting-beanshell-0.2.3.jar:/Applications/Fiji.app/jars/scripting-clojure-0.1.4.jar:/Applications/Fiji.app/jars/scripting-groovy-0.2.3.jar:/Applications/Fiji.app/jars/scripting-java-0.3.5.jar:/Applications/Fiji.app/jars/scripting-javascript-0.4.2.jar:/Applications/Fiji.app/jars/scripting-jruby-0.2.3.jar:/Applications/Fiji.app/jars/scripting-jython-0.2.4.jar:/Applications/Fiji.app/jars/slf4j-api-1.7.6.jar:/Applications/Fiji.app/jars/snakeyaml-1.13.jar:/Applications/Fiji.app/jars/bio-formats/specification-5.1.10.jar:/Applications/Fiji.app/jars/spim_data-2.0.1.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunec.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunjce_provider.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/sunjce_provider.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/sunpkcs11.jar:/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home/lib/ext/sunpkcs11.jar:/Applications/Fiji.app/jars/swing-checkbox-tree-1.0.1.jar:/Applications/Fiji.app/plugins/trakem2_tps-1.1.1.jar:/Applications/Fiji.app/jars/trove4j-3.0.3.jar:/Applications/Fiji.app/jars/bio-formats/turbojpeg-5.1.10.jar:/Applications/Fiji.app/jars/udunits-4.3.18.jar:/Applications/Fiji.app/java/macosx-java3d/Home/lib/ext/vecmath.jar:/System/Library/Java/Extensions/vecmath.jar:/Applications/Fiji.app/jars/wavelets-2.0.0.jar:/Applications/Fiji.app/jars/weave_jy2java-2.0.0-SNAPSHOT.jar:/Applications/Fiji.app/jars/weka-dev-3.7.11.jar:/Applications/Fiji.app/jars/xercesImpl-2.8.1.jar:/Applications/Fiji.app/jars/xml-apis-1.3.03.jar:/Applications/Fiji.app/jars/xmpcore-5.1.2.jar:/Applications/Fiji.app/jars/yecht-1.0.jar:/Applications/Fiji.app/plugins/z_spacing-0.0.1-SNAPSHOT.jar:/Library/Internet%20Plug-Ins/JavaAppletPlugin.plugin/Contents/Home/lib/ext/zipfs.jar, -d, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java2342513084753706305/target/classes, /var/folders/rs/3g07sjxx4g7_vm810yw7bp8c0000gn/T/java2342513084753706305/src/main/java/TimelapseReg_.java] org.scijava.console.MultiPrintStream@1d435cd at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:131) at org.scijava.util.ProcessUtils.exec(ProcessUtils.java:71) at org.scijava.minimaven.JavaCompiler.execute(JavaCompiler.java:169) at org.scijava.minimaven.JavaCompiler.call(JavaCompiler.java:126) ... 15 more