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Diels-Alder alignment tool

A computational chemistry tool that automates the generation of pre-reaction complexes for ORCA/Gaussian scans. Takes product and reactant SMILES strings, expands along the reaction coordinate, and maps reactants onto the fragments to reduce unnecessary DFT optimisation.

Note: endo approach is not guaranteed

Installation

pip install numpy rdkit

## To-do list

- Improve error handling
- Add example cases
- Endo/exo selectivity

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