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6 changes: 1 addition & 5 deletions _quarto.yml
Original file line number Diff line number Diff line change
Expand Up @@ -12,14 +12,12 @@ website:
left:
- href: index.qmd
text: Home
- href: tutorials/progressive_globe.qmd
- href: explorer.qmd
text: Interactive Explorer
- text: How to Use
menu:
- text: Overview
href: how-to-use.qmd
- text: Search Explorer
href: tutorials/isamples_explorer.qmd
- text: Deep-Dive Analysis
href: tutorials/zenodo_isamples_analysis.qmd
- text: About
Expand Down Expand Up @@ -67,8 +65,6 @@ website:
contents:
- href: how-to-use.qmd
text: Overview
- text: "Search Explorer"
href: tutorials/isamples_explorer.qmd
- text: "Deep-Dive Analysis"
href: tutorials/zenodo_isamples_analysis.qmd
- id: about
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2 changes: 1 addition & 1 deletion about.qmd
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Expand Up @@ -20,7 +20,7 @@ The iSamples project will:
* Encourage a high-level metadata standard for natural history samples (across biosciences, geosciences, and archaeology), while supporting community-developed metadata standards in specialist domains.
* Extend existing capabilities, enhance consistency, and expand their reach to serve science and society much more broadly through integration with established discipline-specific infrastructure at SESAR (geoscience), CyVerse (bioscience), Open Context (archaeology), and the Smithsonian Institution.

**Current data access**: The project now uses **geoparquet files + DuckDB-WASM** for efficient, browser-based data access and analysis. See the [Interactive Explorer](/tutorials/progressive_globe.html) for a live demo.
**Current data access**: The project now uses **geoparquet files + DuckDB-WASM** for efficient, browser-based data access and analysis. See the [Interactive Explorer](/explorer.html) for a live demo.

![iSamples Architecture](assets/iSamplesArchitecture.png)
:::
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2 changes: 1 addition & 1 deletion data.qmd
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Expand Up @@ -162,7 +162,7 @@ Approximate breakpoints:

Reference implementations:

- [Interactive Explorer (web)](tutorials/progressive_globe.qmd) — Observable JS + DuckDB-WASM + Cesium
- [Interactive Explorer (web)](explorer.qmd) — Observable JS + DuckDB-WASM + Cesium
- [iSamples Explorer (Python)](https://github.com/isamplesorg/examples/blob/main/examples/basic/isamples_explorer.ipynb) — Jupyter widgets + DuckDB + lonboard

## 5. Full catalog + companion docs
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2 changes: 1 addition & 1 deletion design/index.qmd
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Expand Up @@ -22,7 +22,7 @@ iSamples has defined:
- A **metadata profile** applicable to all physical samples — see the [Metadata Model](https://isamplesorg.github.io/metadata/)
- A set of **controlled vocabularies** for interoperable sample description — see [Vocabularies](../models/index.qmd)
- A **programmatic interface** for sample discovery and access
- A **browser-based data analysis** approach using geoparquet + DuckDB-WASM — see the [Interactive Explorer](/tutorials/progressive_globe.html)
- A **browser-based data analysis** approach using geoparquet + DuckDB-WASM — see the [Interactive Explorer](/explorer.html)

## Further Reading {.unnumbered}

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