pyspots

Code developed in the wollmanlab in order to process images and call spots from MERFISH/seqFISH style experiments.

Name		Name	Last commit message	Last commit date
Latest commit History 131 Commits
analysis_scripts		analysis_scripts
hybescope_config		hybescope_config
ipynotebooks		ipynotebooks
README.md		README.md
fish_results.py		fish_results.py
helpers.py		helpers.py
seqfish_config.py		seqfish_config.py
seqfish_config24bit_ca_cell_v2.py		seqfish_config24bit_ca_cell_v2.py
seqfish_config24bit_ca_cell_v2_idt6430reordered.py		seqfish_config24bit_ca_cell_v2_idt6430reordered.py
seqfish_config_Inflammation.py		seqfish_config_Inflammation.py
seqfish_config_brain_tmi.py		seqfish_config_brain_tmi.py
seqfish_config_inflammation.py		seqfish_config_inflammation.py
seqfish_config_nfkb.py		seqfish_config_nfkb.py
setup.py		setup.py
simple_workflow_datasubset.ipynb		simple_workflow_datasubset.ipynb
workflow_example_datasubset.ipynb		workflow_example_datasubset.ipynb
wrappers.py		wrappers.py

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