This repository was archived by the owner on Mar 4, 2026. It is now read-only.
OsteoSort Version 1.3.0
OsteoSort 1.3.0
Installation
require("devtools")
install_github("jjlynch2/OsteoSort", ref="v1.3.0")
library(OsteoSort)
OsteoSort()R Dependencies
- pixmap
- jpeg
- Morpho
- DT
- shiny
- htmltools
- zip
- rgl
- ClusterR
- JuliaCall
- ggplot2
- shinyalerts
- ggrepel
- networkD3
- network
- sna
- grid
- dplyr
Julia Dependencies
- Pkg
- Statistics
- Distributed
- SharedArrays
- Optim
- Rmath
Changes for OsteoSort version 1.3.0
- The Julia programming language is now integrated as the new analytical platform.
- Reference data can be imported and exported.
- The user interface is now dynamic and generates based on the reference data and user input.
- The ability to check for updates on GitHub has been implemented.
- Z-transform method is now implemeneted.
- Three-dimensional point cloud antimere sorting is now supported.
- Two-dimensional photograph antimere sorting now uses pairwise registration.
Other Windows Dependencies
- Julia must be in your Windows environrment PATH to run.
Known Issues
- Some versions of JuliaCall require RCall to be manually rebuilt in Julia.
- Some newer versions of R may require Sys.setenv(R_REMOTES_NO_ERRORS_FROM_WARNINGS="true") to avoid warnings being converted to errors during installation.