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RRNA Package

Introduction

The RRNA package contains plotting functions for RNA secondary structures. The functions can read in CT files or Coordinate files generated by various RNA secondary structure prediction programs.

References

CT File format can be found here: http://www.ibi.vu.nl/programs/k2nwww/static/data_formats.html

Examples

1. Bracket notation to RNA secondary structure
2. Highlighting and manipulating the secondary structure plot
3. Using ViennaRNA to generate secondary structure layouts
4. Reading in CT files and making RNA secondary structure plots