PAF_INT_neurodev

Repo to accompany Miles, Weaver, Webb, Ojemann, 2025, Journal of Neurophysiology:
https://doi.org/10.1152/jn.00435.2025

Developmental electrocorticography data available at:
https://doi.org/10.5281/zenodo.16954183

Intended order of operations:

1. Download and unzip data
2. Clone this repo and download dependencies (see below)
3. Change the f\_path variable in the notebooks (str directing to data folder)
4. Run load_ephys_save_spect.ipynb
5. Run spect_aper_fitting.ipynb (will probably take awhile)
6. Reproduce figures, analyses with PAF_int_stats_figs.ipynb

In addition to the typical scientific computing dependencies (e.g, scipy, numpy, pandas ... etc.), this code requires:

Pymultitaper - https://github.com/fncokg/pymultitaper

My fork of the Lorentzian branch of FOOOF - https://github.com/jtmiles/fooof/tree/lorentzian/fooof

statsmodels (run on version 14.2) - https://www.statsmodels.org/stable/index.html