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[ENH]: Simplify Preprocess interface#473

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synchon merged 13 commits intomainfrom
refactor/preprocessor
Nov 7, 2025
Merged

[ENH]: Simplify Preprocess interface#473
synchon merged 13 commits intomainfrom
refactor/preprocessor

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@synchon synchon commented Oct 31, 2025

  • description of feature/fix
  • tests added/passed
  • add an entry for the latest changes

This PR refactors the Preprocess interface to simplify implementation logic.

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codecov bot commented Oct 31, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 91.60%. Comparing base (0f459e2) to head (5b51d11).
⚠️ Report is 14 commits behind head on main.

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@@            Coverage Diff             @@
##             main     #473      +/-   ##
==========================================
- Coverage   91.60%   91.60%   -0.01%     
==========================================
  Files         146      146              
  Lines        5956     5919      -37     
  Branches      951      950       -1     
==========================================
- Hits         5456     5422      -34     
+ Misses        324      321       -3     
  Partials      176      176              
Flag Coverage Δ
docs 100.00% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Files with missing lines Coverage Δ
junifer/preprocess/_temporal_filter.py 100.00% <ø> (ø)
junifer/preprocess/_temporal_slicer.py 98.24% <ø> (-0.17%) ⬇️
junifer/preprocess/base.py 90.00% <ø> (+2.24%) ⬆️
.../preprocess/confounds/fmriprep_confound_remover.py 99.45% <ø> (-0.02%) ⬇️
junifer/preprocess/smoothing/smoothing.py 89.28% <ø> (-1.63%) ⬇️
junifer/preprocess/warping/space_warper.py 100.00% <ø> (+3.57%) ⬆️
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@synchon synchon added the maintenance Issues or pull requests related to maintenance label Oct 31, 2025
@synchon synchon added this to the 0.0.7 (alpha 6) milestone Oct 31, 2025
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github-actions bot commented Oct 31, 2025

PR Preview Action v1.6.2
Preview removed because the pull request was closed.
2025-11-07 12:48 UTC

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synchon commented Oct 31, 2025

CI passes on juseless.

@synchon synchon requested a review from fraimondo October 31, 2025 14:20
Comment thread junifer/preprocess/base.py
@synchon synchon merged commit 6eb4899 into main Nov 7, 2025
13 of 17 checks passed
@synchon synchon deleted the refactor/preprocessor branch November 7, 2025 11:57
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