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v0.9.7

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@rafalkowalewski1 rafalkowalewski1 released this 23 Feb 14:29
· 389 commits to master since this release
v0.9.7
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Picasso 0.9.7 is here

Changelog

Important updates:

  • Windows one-click-installer allows for selecting only a subset of Picasso modules to install
  • Added ToRaw and Nanotron to one-click-installer
  • Experimental One-click-installer for macOS (only for Apple Silicon), see here

Small improvements:

  • Adjusted the config.yaml and plugins instructions for the one-click-installer Picasso release (new Pyinstaller stores everything in the _internal folder)
  • G5M output can save more columns (if present in the input localizations)
  • Further enhancement of G5M documentation
  • Render GUI: implemented filter by number of localizations for multichannel data
  • Render GUI: allow removal of any column from localizations, not only group
  • Filter GUI: allow removal of any column from localizations
  • REQUIRED_COLUMNS moved from picasso.localize to picasso.lib

Bug fixes:

  • Fixed basic frame analysis in SMLM clusterer
  • Fixed labels of the vertical lines in the subcluster test plot
  • Fixed automatic Localize loading/unloading z-calibration paths when changing cameras
  • Fixed rel_sigma_z in G5M (previously incorrectly divided by pixel size)
  • Fixed G5M molmap lpz output
  • Fixed loading square picks in Render
  • Fixed appearance of the Apply expression dialog in Render for files with many columns
  • Fixed initial x, y and N in LQ Gaussian fitting (might results in faster convergence and slightly different (<< NeNA) results) (#616)
  • Fixed picking circular regions around left and top edges of the FOV

Notes

⚠️ If installed in Program Files, Render and Localize may not be available for non-administrator users. Therefore, we recommend installing Picasso outside of Program Files. The current default location is C:\Picasso.
⚠️ When using Windows installer, camera config file needs to be moved to C:\Picasso\_internal\picasso. Previously under C:\Picasso\picasso.
⚠️ Windows Safety features and Windows Defender may ask multiple times for permission during the installation and download.
⚠️ If your macOS installer does not open due to potential malware, click on the "?" button and follow the instructions to open Picasso anyway. This needs to be repeated for both the main "picasso" app as well as the individual modules.

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