CLI Reference

atomic-forge <phase> [options] — full surface of the CLI. Source of truth: cli.py.

Phases

Phase	What it does
run	The full generate → qa → repair pipeline over a task batch
generate	Only the generation phase
qa	Only test synthesis from test_triads
repair	Only the repair loop over existing failures (supports --raise-pr)
decompose	Draft an AtomicTaskBatch from a loose spec (--spec, --out)
watch	Production Watchdog: detect → repair → canary → promote/rollback
fix	One-shot issue → regression test → repair → fork-only PR (Issue-to-PR)
fix-comment	Same pipeline driven by a PR review comment (Issue-to-PR)

Common flags

Flag	Applies to	Meaning
--tasks	run/generate/qa/repair	Task batch JSON (default tasks.json)
--project-dir	all	Target project directory (default ./forge_out)
--test-cmd	run/repair/fix	Force a test command instead of auto-detection
--backend local|graph	all (tool backend)	local = in-memory symbol index; graph = persisted SQLite call graph at .forge/codegraph.db
--max-rounds	repair/fix	Repair rounds (default: 3 for repair, 5 for fix)
--samples	repair/fix	Patch candidates K per round (default 2)
--architect	repair/fix	Opt-in planner pass before each round's K-sampling (one extra LLM call; default off — see Planner-Executor-Split)
--local-only	all	Refuse non-loopback LLM endpoints (Data-Privacy-No-Training)
--report jsonl	run	Write artifacts/status/repair events to .forge/reports.jsonl
--timeout	run	Per-phase seconds (default 300)

fix flags

Flag	Meaning
url	Positional GitHub issue URL
--dry-run	Do everything except push to the fork / open the PR
--issue-body-file	Local file (or - for stdin) as the issue body instead of gh fetch
--project-dir	Use a checkout you've already set up (skips the bootstrap gate — you've vouched for it)
--install-cmd	Override the project install command; pass "" to skip installing
--max-turns	Max test-generation agent turns (default 10)
--pr-base / --pr-branch / --pr-title	PR targeting
--skip-bootstrap	Skip the Bootstrap-Gate on a cold clone whose suite you already know runs
--bootstrap-timeout	Seconds the gate's test probe may run (default 600)

raise-pr flags (repair)

Flag	Meaning
--raise-pr	After a green repair, push the fix on a fresh branch and open a GitHub PR via gh
--pr-base	PR base branch (default: repo default)
--pr-branch	Feature branch name (default forge/fix-<ts>)
--pr-title	Override the PR title
--pr-body-file	Path to a markdown PR body

watch flags

Flag	Meaning
--log-file	Log file to tail for tracebacks
--deploy-cmd	Shell-quoted argv to start the app with a {port} token, e.g. 'python app.py {port}'. Omit to patch+commit with no canary phase
--health-path	HTTP path the canary is health-checked on (default /)
--canary-percent	Traffic % sent to the canary (default 10)
--health-checks	Consecutive healthy checks required to promote (default 5)
--poll-interval	Seconds between log polls (default 5.0)
--max-cycles	Stop after N poll cycles (omit to run forever)

fix-comment flags

Flag	Meaning
--repo	owner/repo the PR lives in
--comment-body / --comment-body-file	The review comment text (file may be - for stdin)
--file / --line	The file/line the comment was anchored to
--source-url	The PR/comment URL, used for the PR body's Fixes link

Environment variables

See Installation-and-LLM-Setup for the full LLM resolution order: FORGE_MOCK, FORGE_API_KEY, FORGE_BASE_URL, FORGE_MODEL, OPENAI_API_KEY (+ OPENAI_BASE_URL/OPENAI_MODEL), and FORGE_ENABLE_AGENTIC_BOOTSTRAP (Bootstrap-Gate agentic fallback, opt-in).