Switch to gradle

.gitattributes

@@ -0,0 +1,9 @@
+#
+# https://help.github.com/articles/dealing-with-line-endings/
+#
+# Linux start script should use lf
+/gradlew        text eol=lf
+
+# These are Windows script files and should use crlf
+*.bat           text eol=crlf
+

.github/workflows/test.yml

@@ -34,22 +34,9 @@ jobs:
           distribution: 'temurin'
           java-version: ${{matrix.java}}
 
-      - name: Install dependencies and set up test config
-        shell: bash
-        run: |
-          export HOMEDIR=`pwd`
-
-          # move to parent dir of homedir to install binaries etc
-          cd ..
-
-          # set up jars
-          git clone https://github.com/kbase/jars
-
-          cd $HOMEDIR
-
       - name: Run tests
         run: |
-           make test-coverage
+           ./gradlew test
 
       - name: Upload coverage to Codecov
         uses: codecov/codecov-action@v3

build.gradle

@@ -0,0 +1,130 @@
+/*
+ * This file was generated by the Gradle 'init' task.
+ */
+
+plugins {
+	id 'java'
+	id 'jacoco'
+	id 'maven-publish'
+}
+
+group = 'com.github.kbase'
+
+// TODO GRADLE move files to standard gradle layout
+// TODO GRADLE update docs
+// TODO GRADLE update to jitpack built auth jar (javadoc as well)
+// TODO GRADLE publish w/ jitpack when auth jar pulled from jitpack
+// TODO BUILD get rid of dependency on Syslog4j, 10yo abandonware w/ CVEs
+
+repositories {
+	mavenCentral()
+}
+
+compileJava {
+	// TODO BUILD remove when we no longer support java 8, use `options.release = 11` if needed
+	java.sourceCompatibility = JavaVersion.VERSION_1_8
+	java.targetCompatibility = JavaVersion.VERSION_1_8
+}
+
+java {
+	withSourcesJar()
+	withJavadocJar()
+}
+
+test {
+	forkEvery = 1 // seems to fix a race condition with the logging test
+	testLogging {
+		exceptionFormat = 'full'
+		showStandardStreams = true
+	}
+	finalizedBy jacocoTestReport
+}
+
+jacocoTestReport {
+	reports {
+		xml.required = true
+		csv.required = true
+	}
+}
+
+javadoc {
+	failOnError = false // big effort to fix this one
+	options {
+		// I don't know why this isn't working, but it's not worth spending time on right now
+		links "https://docs.oracle.com/javase/8/docs/api/"
+	}
+}
+
+publishing {
+	publications {
+		maven(MavenPublication) {
+		from components.java
+		}
+	}
+}
+
+sourceSets {
+	main {
+		java {
+			srcDirs = ["src"]
+			exclude '**/test/**'
+			exclude '**/testlogger/**'
+		}
+	}
+	test {
+		java {
+			srcDirs = ["src"]
+			include '**/test/**'
+			include '**/testlogger/**'
+		}
+	}
+}
+
+def fromURL = { url, name ->
+	File file = new File("$buildDir/download/${name}.jar")
+	file.parentFile.mkdirs()
+	if (!file.exists()) {
+		new URL(url).withInputStream { downloadStream ->
+			file.withOutputStream { fileOut ->
+				fileOut << downloadStream
+			}
+		}
+	}
+	files(file.absolutePath)
+}
+
+dependencies {
+
+	// using older dependencies to not force upgrades on services that might not be able to
+	// handle them. Need to upgrade the services and then upgrade here
+	implementation 'com.fasterxml.jackson.core:jackson-annotations:2.9.9'
+	implementation 'com.fasterxml.jackson.core:jackson-databind:2.9.9'
+	implementation fromURL(
+		'https://github.com/kbase/jars/raw/master/lib/jars/kbase/auth/kbase-auth-0.4.2.jar',
+		'kbase-auth-0.4.4'
+	)
+	implementation 'org.apache.commons:commons-lang3:3.1'
+	implementation 'org.slf4j:slf4j-api:1.7.7'
+	implementation 'ch.qos.logback:logback-classic:1.1.2'
+	implementation 'org.ini4j:ini4j:0.5.2'
+	implementation 'javax.servlet:servlet-api:2.5'
+	implementation 'joda-time:joda-time:2.2'
+	// TODO CODE ideally we could rewrite java-common so it didn't have a runtime dependency on
+	//           jetty
+	implementation 'org.eclipse.jetty.aggregate:jetty-all:7.0.0.v20091005'
+	// TODO DEPS Need to rework the java common logger to not use syslog4j at all since it's
+	// abandonware and has a ton of CVEs, even in the newer versions.
+	implementation fromURL(
+		'https://github.com/kbase/jars/raw/master/lib/jars/syslog4j/syslog4j-0.9.46.jar',
+		'syslog4j-0.9.46'
+	)
+	// needed for syslog4j
+	implementation 'net.java.dev.jna:jna:3.4.0'
+
+	testImplementation 'junit:junit:4.9'
+	testImplementation 'com.google.guava:guava:18.0'
+	testImplementation 'org.mockito:mockito-core:3.0.0'
+	testImplementation 'com.github.zafarkhaja:java-semver:0.9.0'
+	testImplementation 'commons-io:commons-io:2.4'
+
+}