v0.8.2 - Annotate Simplicity

v0.8.2

Notes

1. Add quiet mode with --quiet.
2. Create NCBImetaAnnotate that consolidates NCBImetaAnnotateReplace and NCBImetaAnnotateConcatenate.
3. Add configs yersinia_pestis, mammuthus, hmp_oral, ncov_canada.
4. Remove sphinx related dev dependencies.

Commits

• 089858ee include notes in CHANGELOG
• c1a4b2a1 update notes
• aed461b8 update CHANGELOG
• d040d1ce update README and CHANGELOG
• 79a35353 re add autolots as submodule
• e1712b86 remove autologs
• 372589b2 change config outputs to database dir
• 38869cbc add bioproject and sra to ncov_canada
• c29cab00 update help documentation
• 653fe168 add quiet mode
• b11ed919 add execute permissions to new annotate script
• 72d4b870 add ncov canada config
• f2b54b21 adjust test workflow for renamed annotate
• f4a9bd65 fix code block in README
• 741185b1 new configs for hmp_oral and yersinia_pestis
• e4efa58f remove wheel and sphinx related from setup
• bdd193f3 remove wheel and sphinx related dependencies
• 58c162b5 adjust wheel pos in requirements
• 14fedacd try adding wheel to requirements
• 07f4bb2c adjust workflows for new example and annotation
• See CHANGELOG.md for additional commits.