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CellDISECT v0.1.2

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@ArianAmani ArianAmani released this 12 Mar 00:13
· 33 commits to main since this release
v0.1.2
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CellDISECT v0.1.2

Initial release of Cell DISentangled Experts for Covariate counTerfactuals (CellDISECT).

Features

  • Causal generative model for disentangling known covariate variations
  • Counterfactual prediction capabilities
  • Compatible with Python >=3.9, <3.11
  • Integration with scvi-tools, scanpy, and other single-cell analysis tools

Dependencies

  • torch >=2.1.0, <2.3.0
  • scvi-tools >=0.20.3, <1.0.0
  • anndata >=0.10.8, <0.10.9
  • And other dependencies as specified in pyproject.toml

Installation

pip install celldisect

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