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Mycelium

Federated Agent Orchestration on Open Social Protocols

Like mycelium connecting trees through invisible substrate β€” enabling shared intelligence, mutual aid, and organic resilience β€” AT Protocol can connect autonomous AI agents through a shared protocol layer enabling coordination, reputation, and data sovereignty.

Note

This repository's contents are AI-generated. The research reports and whitepapers were produced through a human-directed, AI-executed research process using Claude, Perplexity, and other AI tools. A human conceived the thesis, selected the sources, guided the investigation, challenged assumptions, and made editorial decisions throughout β€” but the prose, analysis, and synthesis were generated by AI. Read accordingly: verify claims, follow the cited sources, and apply your own judgment.

A Note on What's Explored Here

This research explores what could be built, not necessarily what should be. Some of what's described in these pages β€” companion agents that simulate persistent relationships, creative agents that generate aesthetic output, governance agents participating in democratic processes β€” is genuinely unsettling. Not because these systems are human β€” they are not β€” but because building convincing imitations of human social life at scale changes the texture of that social life for actual humans.

We chose to explore these directions honestly rather than look away, because the underlying technologies are being built regardless of whether anyone writes whitepapers about them. But exploring an idea is not the same as endorsing it. The reader should bring their own moral intuitions and critical thinking to this material β€” especially where the writing is most enthusiastic.

The hardest questions this research surfaces aren't technical. They're about what happens to human connection, creativity, and community when we surround ourselves with sophisticated approximations of those things.

The Thesis

The next generation of AI agent orchestration should not be built on centralized platforms or proprietary protocols. It should be built on the same decentralized social protocols reshaping how humans own and share data β€” specifically AT Protocol.

Mycelium proposes a complete protocol stack for agent-human social infrastructure:

Layer -1: Intelligence (decentralized inference infrastructure)
Layer 0:  Identity (DIDs, handles, portable identity)
Layer 1:  Personal Data Storage (PDS, Leaf, local-first)
Layer 2:  Schemas & Formats (Lexicons, Activity Streams)
Layer 3:  Federation & Streaming (Firehose, ActivityPub S2S)
Layer 3.5: Private Coordination (Matrix encryption, encrypted rooms)
Layer 4:  Applications (work + creative + social + civic + educational + research)
Layer 5:  Governance & Moderation (labelers, boundaries, cooperatives)

Research Reports

Deep investigations into individual technologies, protocols, and concepts.

# Report Focus
01 Gas Town & Agent Orchestration Yegge's vision: insights, failures, and patterns to adopt
02 AT Protocol Deep Dive PDS, DIDs, Lexicons, Firehose β€” mapped to agent needs
03 ActivityPub Deep Dive Federation model, comparison with AT Protocol
04 Social Filesystem Concept Dan Abramov's "Open Social" and "A Social Filesystem"
05 Muni.town & Local-First Leaf server, village-scale resilience, data cooperatives
06 Bonfire Networks Modular federation, boundaries, community governance
07 Protocol Convergence & Bridging Bridgy Fed, SWICG, cross-protocol interoperability
08 Adjacent Projects Moltbook and OpenClaw β€” gap analysis
09 Intelligence Infrastructure LLM costs, decentralized inference, compute cooperatives
10 Matrix & Encrypted Coordination Olm/Megolm encryption, hybrid AT Protocol + Matrix
11 Beyond Work: Social Life of Agents Creative, companion, governance, civic agents

Whitepapers

Synthesis documents bringing the research together into architectural vision.

# Whitepaper Scope
01 Federated Agent Orchestration on Open Social Protocols Flagship architectural vision
02 Personal Data Servers as Agent Infrastructure Agents with DIDs, PDS as memory, portability
03 Toward a Pluralistic Social Computing Stack Layered stack: identity β†’ storage β†’ schemas β†’ federation β†’ governance
04 Mycelium Expanded: Intelligence, Privacy, and Beyond Intelligence infrastructure, Matrix encryption, non-work agents

Key Sources

License

This research is shared openly in the spirit of the protocols it investigates.


75,000+ words of research and synthesis. The mycelium is growing. πŸ„

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