Authors: Roberto Rodriguez Osorio, University of A Corunna, Spain; Manuel de Castro Caballero, University of Valladolid, Spain.
This work-in-progress repository contains the hardware architecture for a Differential Evolution engine used for scientific model optimization on FPGAs. The designs for two use cases of the engine, the optimization of the Hodgkin-Huxley model for neuron activation, and Circadian clock model for Arabidopsis thaliana, are included.
Software (CPU and GPU) references to make performance comparisons are also included.