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ngmaster 2.0.6

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@himal2007 himal2007 released this 09 Jun 01:54
· 13 commits to master since this release
v2.0.6
addbffb

This release includes all updates since 2.0.0, with a focus on faster runtime, improved CLI behaviour, database configuration, CI stability, and dependency security.

Highlights

  • Improved NG-MAST/NG-STAR runtime by parallelising scheme execution and optimising match_porb to avoid repeated file I/O.
  • Added $NGMASTER_DB support so users can set a default database path without passing --db each time.
  • Improved --mincov, --minid, --printseq, --db, and --version behaviour and help text.
  • Fixed PubMLST database update issues, including OAuth/API-key handling and mlstdb compatibility.
  • Improved error reporting when mlst subprocesses fail.
  • Added security dependency floors for requests, urllib3, certifi, idna, and related packages.
  • Fixed CI, packaging, and publish workflow issues.

See CHANGELOG.md for the full list of changes.

Full Changelog: v2.0.0...v2.0.6

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