Entropy of Complex Networks

Scientific project funded by the Polish National Science Center

Project description, publications, data, and code are described at project's website

Using Jupytext for working with notebooks

We mostly use Jupyter Notebooks environment for working on experiments. However, the experiments are stored in the repository using percent format. It has the following benefits:

• The changes are easy to track and review in pull requests,
• The files are valid python scripts (unlike notebooks) so all the IDE support like code analysis, refactoring etc. works out of the box,
• percent format is compatible with a wide range of environments which is especially helpful when team members want to use different environments. The format is supported by:
  • Spyder IDE,
  • Hydrogen, a notebook editor based on Atom,
  • VS Code when using the vscodeJupyter extension,
  • Python Tools for Visual Studio,
  • and PyCharm Professional

Follow the instructions to install Jupytext.

Jupytext tool automatically convert paired notebooks to and from percent format once the notebooks are paired. To pair all the scripts and to generate notebooks from them the first time, run the script pair_notebooks.py. The script needs to run only once after cloning clean repository.