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MCMC changes and maintenance

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@Immudzen Immudzen released this 09 Jun 10:10
· 72 commits to master since this release
v0.6.50
7885b23

MCMC removes the burn-in step entirely and instead runs for 2 more integrated autocorrelation times and discards the first two autocorrelation times. This ensures the chain is independent of the starting state.

numba is now required and some functions in CADETMatch now use numba for acceleration

Removed spearman graphs
Support addict 2.4.0

Lots of other small fixes to the code and cleanups

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