Skip to content

Fix DKI radial kurtosis calcualtion and update WMTi#245

Merged
TheJaeger merged 19 commits into
masterfrom
develop
Feb 12, 2021
Merged

Fix DKI radial kurtosis calcualtion and update WMTi#245
TheJaeger merged 19 commits into
masterfrom
develop

Conversation

@TheJaeger
Copy link
Copy Markdown
Collaborator

This PR adds missing AKC calculation that led to radial kurtosis being the same as axial kurtosis.

WMTI calculations have also been updated and validated to match DKE.

TheJaeger and others added 19 commits September 22, 2020 13:01
* Update reslicing to use new `mrgrid` command

This also works with older `mrreslice`

* Fix bad indent in tensorReorder()

* Update documentation
* Add try/except loop to SNR plot

* Fix eddy path when `--noqc` is parsef

* Fix a bad indent

* Update CHANGELOG
* Init tractography module with DSI Studio

* Update main to use tractography modules

* Update version and MANIFEST

* Update docs
* Fix DTI protocol (#228)

* Update reslicing to use new `mrgrid` command

This also works with older `mrreslice`

* Fix bad indent in tensorReorder()

* Update documentation

* Add bval scaling (#230)

* Fix SNR plotting issues (#233)

* Add try/except loop to SNR plot

* Fix eddy path when `--noqc` is parsef

* Fix a bad indent

* Update CHANGELOG

* Init tractography module (#234)

* Init tractography module with DSI Studio

* Update main to use tractography modules

* Update version and MANIFEST

* Update docs
* Add new functions to determine DWI shell sampling

* Remove references to old functions

* Change how shell sampling is determined

* Update documentation
@TheJaeger TheJaeger merged commit db97d29 into master Feb 12, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant