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Docker build fixes#247

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TheJaeger merged 20 commits into
masterfrom
develop
Feb 12, 2021
Merged

Docker build fixes#247
TheJaeger merged 20 commits into
masterfrom
develop

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TheJaeger and others added 20 commits September 22, 2020 13:01
* Update reslicing to use new `mrgrid` command

This also works with older `mrreslice`

* Fix bad indent in tensorReorder()

* Update documentation
* Add try/except loop to SNR plot

* Fix eddy path when `--noqc` is parsef

* Fix a bad indent

* Update CHANGELOG
* Init tractography module with DSI Studio

* Update main to use tractography modules

* Update version and MANIFEST

* Update docs
* Fix DTI protocol (#228)

* Update reslicing to use new `mrgrid` command

This also works with older `mrreslice`

* Fix bad indent in tensorReorder()

* Update documentation

* Add bval scaling (#230)

* Fix SNR plotting issues (#233)

* Add try/except loop to SNR plot

* Fix eddy path when `--noqc` is parsef

* Fix a bad indent

* Update CHANGELOG

* Init tractography module (#234)

* Init tractography module with DSI Studio

* Update main to use tractography modules

* Update version and MANIFEST

* Update docs
* Add new functions to determine DWI shell sampling

* Remove references to old functions

* Change how shell sampling is determined

* Update documentation
* Update Dockerfile to meet new Python CMake requirements

* Remove redundant Dockerfile
@TheJaeger TheJaeger merged commit cdd1187 into master Feb 12, 2021
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