Updating amplicon workflow#48
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AstrobioMike merged 5 commits intoampliconfrom Jan 16, 2024
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- fix for ITS datasets where biom object creation could fail due to duplicate domain column in taxonomy object in SE datasets
- resource usage settings added to some rules due to recent change in our cluster setup - added assay-specific suffixes to filenames requiring them for GeneLab system - added slurm-status script for if using slurm to catch and report messages from slurm system (used by adding --cluster-status scripts/slurm-status.py to the snakemake call)
AstrobioMike
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