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Bug fix: Previous versions of AMRFinderPlus missed some point mutations in Klebsiella parC and gyrA when the query gene was more similar to the E. coli reference.
Several improvements that increase speed and improve parallelization. Speedups range from a few percent to more than 70% depending on number of threads and the characteristics of the input sequence.
Fix for database --update bug when parent directories did not exist (#57)
Improved error message on missing blast database (issue #53)
Bug fix: AMRFinderPlus will remove '-' from files passed to HMMER / BLAST because some versions of HMMER choke on protein files with '-' characters