Thalamic neural mass model and Exploration tools
We're happy to introduce a few new features in this release!
- 🧠 New model: Thalamus model
ThalamicMassModel(thanks to @jajcayn)- Model by Costa et al. 2016, PLOS Computational Biology
- ⚒ New tools for parameter exploration:
explorationUtils.pyakaeu- Postprocessing of exploration results using
eu.processExplorationResults() - Find parameters of explored simulations using
eu.findCloseResults() - Plot exploration results via
eu.plotExplorationResults()(see example image below)
- Postprocessing of exploration results using
- 🧪 Custom transformation of the inputs to the
BOLDModel.- This is particularly handy for phenomenological models (such as
FHNModel,HopfModelandWCModel) which do not produce firing rate outputs with units inHz.
- This is particularly handy for phenomenological models (such as
- 🔬Improvements
- Models can now generate random initial conditions using
model.randomICs() model.params['bold'] = Trueforces BOLD simulationBoxSearchclass:search.run()passes arguments tomodel.run()- BOLD output time array renamed to
t_BOLD
- Models can now generate random initial conditions using
🖼 Example image generated by eu.plotExplorationResults(): Exploration results of a brain network of FHNModel nodes using the hcp dataset.
