Skip to content

Fix annotation colors #212

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Merged
larsoner merged 2 commits into from
Oct 3, 2017
Merged

Fix annotation colors #212

larsoner merged 2 commits into from
Oct 3, 2017

Conversation

@wmvanvliet
Copy link
Contributor

@wmvanvliet wmvanvliet commented Oct 3, 2017

When annotating the brain with a brain atlas, the colors are not always set right:

import surfer
brain = surfer.Brain('fsaverage', hemi='both', surf='inflated')
brain.add_annotation('aparc', borders=False)

fig1

This has to do with the reordering of cmap and the translation of the ids vector. This PR fixes it:

fig2

@larsoner larsoner merged commit a51901f into nipy:master Oct 3, 2017
@larsoner
Copy link
Contributor

larsoner commented Oct 3, 2017

Thanks @wmvanvliet

@wmvanvliet wmvanvliet deleted the fix_annotation_colors branch October 24, 2017 09:26
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@agramfort agramfort agramfort approved these changes

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

3 participants

@wmvanvliet @larsoner @agramfort