What's Changed
-
Dev bilayers by @TorecLuik in NL-BioImaging/biomero-scripts#10
-
Dev bilayers by @TorecLuik in #29 - See the PR for more details
- This brings a major schema addition: BIOMERO now supports workflows beyond BIAFLOWS -> BILAYERS
- Major features include: define I/O in your descriptor (
config.yaml), including Zarr or even non-image formats!
-
Bump some dependencies to latest versions
Upgrade from 2.6
- After upgrading, reset the BIOMERO tracker/view tables by starting a client with
init_slurm=True
From Python (on your biomero worker):
slurmClient = SlurmClient.from_config(init_slurm=True)
Or from OMERO: Run the Slurm Init script as admin.
No data will be lost, but the table structure will be updated for our eventsourcing dependency upgrade.
Full Changelog: v2.6.0...v2.7.0
Full Changelog: NL-BioImaging/biomero-scripts@v2.6.0...v2.7.0