#670 repair bug in selex 41

[Rick-Methot-NOAA]

input from user: @jimianelli

Concisely describe what has been changed/addressed in the pull request.

repairs an indexing error for parameters in age selex 41 that scales over a defined age range

• Resolves issue [Bug]: indexing error in age-selex 41 #670

What tests have been done?

the ebswp files from Jim run properly with the revised code. The syntax of the correct input is in the snippet attached to the issue.

Where are the relevant files?

<-- - [x] No test files are required for this pull request. -->

What tests/review still need to be done?

Is there an input change for users to Stock Synthesis?

Additional information (optional).

[e-perl-NOAA]

@Rick-Methot-NOAA Did you already confirm that it works on Jim's files?

[jimianelli]

thanks!

[jimianelli]

Seems to work as advertised. Keep track of which ages the parameters affect.

[e-perl-NOAA]

@jimianelli, Is there any additional guidance in the user manual that needs to happen with this?

[jimianelli]

great question. In the section describing selex 41 I would be explicit about the order and meaning of the parameter specifications. need to define that nages = max age (typically excludes zero...). Off the top it goes:
p1: low-age
p2: high-age (where these are the age range over which to compute mean for normalizing)
then the description in selex 17. So in the table:

put a "...." after 2nd row and something like "As in selex 17" so the order is clearer, and maybe bold face the last sentence before this table.